RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RESTQ13127 1097 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 FBXO18Q8NFZ0 1043 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 BRF1Q92994 677 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 CALCOCO1Q9P1Z2 691 aa5.34□□□□□ -1.55
DEPDC1-202ENST00000456315 VGFO15240 615 aaPredicted RBP5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 FDPSP14324 419 aaKnown RBP5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 MRPS25P82663 173 aaKnown RBP5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 PDE4BQ07343 736 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 POLA2Q14181 598 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 MCM6Q14566 821 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 SULT6B1Q6IMI4 303 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 TMED8Q6PL24 325 aaPredicted RBP5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 AOPEPQ8N6M6 819 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 FRMPD1Q5SYB0 1578 aa5.34□□□□□ -1.56
DEPDC1-202ENST00000456315 GSCP56915 257 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 VSNL1P62760 191 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 LARP1BQ659C4 914 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 LRRC31Q6UY01 552 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 APTXQ7Z2E3 356 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 KIFC2Q96AC6 838 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 DHX58Q96C10 678 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 EAF2Q96CJ1 260 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 MRFAP1L1Q96HT8 127 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 JAKMIP1Q96N16 626 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 AIFM3Q96NN9 605 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 RASSF4Q9H2L5 321 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 PDE11AQ9HCR9 933 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 DEPDC5O75140 1603 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 ADGRB3O60242 1522 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 AGPSO00116 658 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 SETD1AO15047 1707 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 KCNQ3O43525 872 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 PPP1R42Q7Z4L9 355 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 IFNKQ9P0W0 207 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 TTC21BQ7Z4L5 1316 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 RAB11FIP3O75154 756 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 MAP3K9P80192 1104 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 GRIN1Q05586 938 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 DHX8Q14562 1220 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 SARM1Q6SZW1 724 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 FAM228AQ86W67 206 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CARD10Q9BWT7 1032 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 OSBPL5Q9H0X9 879 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 PAXBP1Q9Y5B6 917 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 FANCAO15360 1455 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 SASH1O94885 1247 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 PTMSP20962 102 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 LONRF2Q1L5Z9 754 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 FAM43BQ6ZT52 329 aaPredicted RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 USP49Q70CQ1 688 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CHST3Q7LGC8 479 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 SSH3Q8TE77 659 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CLSTN2Q9H4D0 955 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CRB1P82279 1406 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 RIMS2Q9UQ26 1411 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 FOXP2O15409 715 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 PRPF6O94906 941 aaKnown RBP5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 EVCP57679 992 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 KCNB2Q92953 911 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CFAP53Q96M91 514 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 TNMDQ9H2S6 317 aa5.33□□□□□ -1.56
DEPDC1-202ENST00000456315 CPS1P31327 1500 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 PREX2Q70Z35 1606 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 UHRF1BP1LA0JNW5 1464 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 PRAMEF22A3QJZ6 481 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 LMAN1P49257 510 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 UTP14AQ9BVJ6 771 aaKnown RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 MAST1Q9Y2H9 1570 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 ZMYND10O75800 440 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 APOBRQ0VD83 1088 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 CCDC30Q5VVM6 783 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 FMR1NBQ8N0W7 255 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 URI1O94763 535 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 CDC25AP30304 524 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 NDUFA8P51970 172 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 SLC39A6Q13433 755 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 EIF4A2Q14240 407 aaKnown RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 HLFQ16534 295 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 RHPN1Q8TCX5 695 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 SMC3Q9UQE7 1217 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 ELP1O95163 1332 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 MAP3K19Q56UN5 1328 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 SKAP2O75563 359 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 WDHD1O75717 1129 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 CYP21A2P08686 494 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 GPATCH11Q8N954 259 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 MAP4K1Q92918 833 aa5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 TEX13AQ9BXU3 409 aaPredicted RBP5.32□□□□□ -1.56
DEPDC1-202ENST00000456315 REREQ9P2R6 1566 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 MYO3AQ8NEV4 1616 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 QRICH2Q9H0J4 1663 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 MICAL3Q7RTP6 2002 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 NUTM2FA1L443 756 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 ACTN2P35609 894 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 AXDND1Q5T1B0 1012 aaPredicted RBP5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 RAD9BQ6WBX8 426 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 CCDC129Q6ZRS4 1044 aa5.31□□□□□ -1.56
DEPDC1-202ENST00000456315 TOGARAM2Q6ZUX3 1019 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms