RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 COL9A3Q14050 684 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-203ENST00000456150 DDX46Q7L014 1031 aaKnown RBP23.83■■□□□ 1.41
CSPG5-203ENST00000456150 ATG3Q9NT62 314 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 ZKSCAN5Q9Y2L8 839 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 NDUFB9Q9Y6M9 179 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 TNS2Q63HR2 1409 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 SPEF2Q9C093 1822 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 ZNF500O60304 480 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-203ENST00000456150 A1BGP04217 495 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 C8orf37Q96NL8 207 aa23.83■■□□□ 1.41
CSPG5-203ENST00000456150 CDC37L1Q7L3B6 337 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 NEUROD6Q96NK8 337 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 HELLSQ9NRZ9 838 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 ELP1O95163 1332 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 SPATA31A1Q5TZJ5 1347 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 LRP6O75581 1613 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-203ENST00000456150 PAG1Q9NWQ8 432 aa23.82■■□□□ 1.4
CSPG5-203ENST00000456150 EYA2O00167 538 aa23.81■■□□□ 1.4
CSPG5-203ENST00000456150 CIAO1O76071 339 aa23.81■■□□□ 1.4
CSPG5-203ENST00000456150 CCDC129Q6ZRS4 1044 aa23.81■■□□□ 1.4
CSPG5-203ENST00000456150 NWD2Q9ULI1 1742 aa23.81■■□□□ 1.4
CSPG5-203ENST00000456150 OFD1O75665 1012 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 HMGB1P09429 215 aaKnown RBP23.8■■□□□ 1.4
CSPG5-203ENST00000456150 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 SEC62Q99442 399 aaKnown RBP23.8■■□□□ 1.4
CSPG5-203ENST00000456150 ZBTB3Q9H5J0 574 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 DTNBO60941 627 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 CYP21A2P08686 494 aa23.8■■□□□ 1.4
CSPG5-203ENST00000456150 STK3Q13188 491 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 TPRNQ4KMQ1 711 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 NGLY1Q96IV0 654 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.79■■□□□ 1.4
CSPG5-203ENST00000456150 LAMA4Q16363 1823 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 GOLIM4O00461 696 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 Q6ZUG5 572 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 DSCC1Q9BVC3 393 aa23.79■■□□□ 1.4
CSPG5-203ENST00000456150 SCAND2PQ9GZW5 306 aaPredicted RBP23.79■■□□□ 1.4
CSPG5-203ENST00000456150 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
CSPG5-203ENST00000456150 TOGARAM1Q9Y4F4 1720 aa23.78■■□□□ 1.4
CSPG5-203ENST00000456150 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
CSPG5-203ENST00000456150 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
CSPG5-203ENST00000456150 PTMAP06454 111 aaKnown RBP23.78■■□□□ 1.4
CSPG5-203ENST00000456150 FERMT3Q86UX7 667 aa23.77■■□□□ 1.4
CSPG5-203ENST00000456150 HSP90B1P14625 803 aaKnown RBP23.77■■□□□ 1.4
CSPG5-203ENST00000456150 TIMM10P62072 90 aa23.77■■□□□ 1.4
CSPG5-203ENST00000456150 TTC6Q86TZ1 520 aa23.77■■□□□ 1.4
CSPG5-203ENST00000456150 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.77■■□□□ 1.4
CSPG5-203ENST00000456150 FUCA2Q9BTY2 467 aa23.77■■□□□ 1.4
CSPG5-203ENST00000456150 BCL9LQ86UU0 1499 aa23.76■■□□□ 1.39
CSPG5-203ENST00000456150 SPATA31A6Q5VVP1 1343 aa23.76■■□□□ 1.39
CSPG5-203ENST00000456150 HCLS1P14317 486 aaPredicted RBP23.76■■□□□ 1.39
CSPG5-203ENST00000456150 ZMYM1Q5SVZ6 1142 aa23.76■■□□□ 1.39
CSPG5-203ENST00000456150 ISCA1Q9BUE6 129 aa23.76■■□□□ 1.39
CSPG5-203ENST00000456150 CHGBP05060 677 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 IFIT1P09914 478 aaKnown RBP23.75■■□□□ 1.39
CSPG5-203ENST00000456150 LRRC24Q50LG9 513 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 FBXO3Q9UK99 471 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 A0A1B0GUL7 405 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 EXOC5O00471 708 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 TPM2P07951 284 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 GIMAP6Q6P9H5 292 aa23.75■■□□□ 1.39
CSPG5-203ENST00000456150 FGD1P98174 961 aa23.74■■□□□ 1.39
CSPG5-203ENST00000456150 TCIRG1Q13488 830 aa23.74■■□□□ 1.39
CSPG5-203ENST00000456150 LRRFIP1Q32MZ4 808 aaKnown RBP23.74■■□□□ 1.39
CSPG5-203ENST00000456150 DHX32Q7L7V1 743 aaKnown RBP23.74■■□□□ 1.39
CSPG5-203ENST00000456150 ZNF594Q96JF6 807 aaPredicted RBP23.74■■□□□ 1.39
CSPG5-203ENST00000456150 LLPHQ9BRT6 129 aaKnown RBP23.74■■□□□ 1.39
CSPG5-203ENST00000456150 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
CSPG5-203ENST00000456150 CEP126Q9P2H0 1117 aa23.74■■□□□ 1.39
CSPG5-203ENST00000456150 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
CSPG5-203ENST00000456150 CCDC57Q2TAC2 916 aa23.73■■□□□ 1.39
CSPG5-203ENST00000456150 SPATA32Q96LK8 384 aa23.73■■□□□ 1.39
CSPG5-203ENST00000456150 TEX13AQ9BXU3 409 aaPredicted RBP23.73■■□□□ 1.39
CSPG5-203ENST00000456150 USP25Q9UHP3 1055 aa23.73■■□□□ 1.39
CSPG5-203ENST00000456150 RNF113AO15541 343 aaKnown RBP23.72■■□□□ 1.39
CSPG5-203ENST00000456150 CCDC192P0DO97 292 aa23.72■■□□□ 1.39
CSPG5-203ENST00000456150 BRF1Q92994 677 aa23.72■■□□□ 1.39
CSPG5-203ENST00000456150 AKAP2Q9Y2D5 859 aa23.72■■□□□ 1.39
CSPG5-203ENST00000456150 GOLGA6L4A6NEF3 574 aa23.72■■□□□ 1.39
CSPG5-203ENST00000456150 TRIM28Q13263 835 aaKnown RBP23.72■■□□□ 1.39
CSPG5-203ENST00000456150 STOX1Q6ZVD7 989 aa23.72■■□□□ 1.39
CSPG5-203ENST00000456150 JAK2O60674 1132 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 PFKFB2O60825 505 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 TERF1P54274 439 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 FNBP4Q8N3X1 1017 aaPredicted RBP23.71■■□□□ 1.39
CSPG5-203ENST00000456150 NUP62CLQ9H1M0 184 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 ZSCAN16Q9H4T2 348 aaPredicted RBP23.71■■□□□ 1.39
CSPG5-203ENST00000456150 H3BQV1 296 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 IFFO2Q5TF58 517 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 FAM173BQ6P4H8 233 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 KIF6Q6ZMV9 814 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 VSIG10Q8N0Z9 540 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 KIF3AQ9Y496 699 aa23.71■■□□□ 1.39
CSPG5-203ENST00000456150 KDM4AO75164 1064 aa23.7■■□□□ 1.38
CSPG5-203ENST00000456150 ADCY5O95622 1261 aa23.7■■□□□ 1.38
CSPG5-203ENST00000456150 HSPD1P10809 573 aaKnown RBP23.7■■□□□ 1.38
CSPG5-203ENST00000456150 CCDC158Q5M9N0 1113 aa23.7■■□□□ 1.38
CSPG5-203ENST00000456150 SMARCC2Q8TAQ2 1214 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms