RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 DOK7Q18PE1 504 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 COL13A1Q5TAT6 717 aaPredicted RBP15.88■□□□□ 0.13
SMCR2-201ENST00000456090 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
SMCR2-201ENST00000456090 ABT1Q9ULW3 272 aaKnown RBP15.88■□□□□ 0.13
SMCR2-201ENST00000456090 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
SMCR2-201ENST00000456090 TRAF5O00463 557 aa15.87■□□□□ 0.13
SMCR2-201ENST00000456090 UFL1O94874 794 aa15.87■□□□□ 0.13
SMCR2-201ENST00000456090 VEGFBP49765 207 aa15.87■□□□□ 0.13
SMCR2-201ENST00000456090 ANKRD18AQ8IVF6 992 aa15.87■□□□□ 0.13
SMCR2-201ENST00000456090 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
SMCR2-201ENST00000456090 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
SMCR2-201ENST00000456090 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 VAMP4O75379 141 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
SMCR2-201ENST00000456090 FKBP5Q13451 457 aaPredicted RBP15.86■□□□□ 0.13
SMCR2-201ENST00000456090 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 UBE3BQ7Z3V4 1068 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 TRPM4Q8TD43 1214 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 ZC3H12CQ9C0D7 883 aaKnown RBP15.86■□□□□ 0.13
SMCR2-201ENST00000456090 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
SMCR2-201ENST00000456090 KCNQ5Q9NR82 932 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 GGA1Q9UJY5 639 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
SMCR2-201ENST00000456090 H7C1D1 291 aa15.85■□□□□ 0.13
SMCR2-201ENST00000456090 HIRAP54198 1017 aaPredicted RBP15.85■□□□□ 0.13
SMCR2-201ENST00000456090 TTLL11Q8NHH1 800 aa15.85■□□□□ 0.13
SMCR2-201ENST00000456090 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
SMCR2-201ENST00000456090 GREM2Q9H772 168 aa15.85■□□□□ 0.13
SMCR2-201ENST00000456090 XDHP47989 1333 aa15.85■□□□□ 0.13
SMCR2-201ENST00000456090 G3V3G9 751 aa15.84■□□□□ 0.13
SMCR2-201ENST00000456090 H7C1W4 665 aa15.84■□□□□ 0.13
SMCR2-201ENST00000456090 DCAF8Q5TAQ9 597 aa15.84■□□□□ 0.13
SMCR2-201ENST00000456090 DNAAF4Q8WXU2 420 aa15.84■□□□□ 0.13
SMCR2-201ENST00000456090 DPF2Q92785 391 aa15.84■□□□□ 0.13
SMCR2-201ENST00000456090 GCKRQ14397 625 aa15.83■□□□□ 0.12
SMCR2-201ENST00000456090 CST9Q5W186 159 aa15.83■□□□□ 0.12
SMCR2-201ENST00000456090 ZC3H15Q8WU90 426 aaKnown RBP15.83■□□□□ 0.12
SMCR2-201ENST00000456090 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.12
SMCR2-201ENST00000456090 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
SMCR2-201ENST00000456090 PGAP2Q9UHJ9 254 aa15.83■□□□□ 0.12
SMCR2-201ENST00000456090 ZNF646O15015 1829 aaPredicted RBP15.82■□□□□ 0.12
SMCR2-201ENST00000456090 RPS12P25398 132 aaKnown RBP15.82■□□□□ 0.12
SMCR2-201ENST00000456090 SAMD7Q7Z3H4 446 aa15.82■□□□□ 0.12
SMCR2-201ENST00000456090 LINS1Q8NG48 757 aa15.82■□□□□ 0.12
SMCR2-201ENST00000456090 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
SMCR2-201ENST00000456090 WDR33Q9C0J8 1336 aaKnown RBP15.82■□□□□ 0.12
SMCR2-201ENST00000456090 THSD7BQ9C0I4 1608 aa15.82■□□□□ 0.12
SMCR2-201ENST00000456090 A0A1B0GUL6 1792 aa15.82■□□□□ 0.12
SMCR2-201ENST00000456090 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
SMCR2-201ENST00000456090 EGFRP00533 1210 aa15.81■□□□□ 0.12
SMCR2-201ENST00000456090 VIL1P09327 827 aaKnown RBP15.81■□□□□ 0.12
SMCR2-201ENST00000456090 ATP2B4P23634 1241 aa15.81■□□□□ 0.12
SMCR2-201ENST00000456090 TBC1D10BQ4KMP7 808 aaPredicted RBP15.81■□□□□ 0.12
SMCR2-201ENST00000456090 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
SMCR2-201ENST00000456090 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
SMCR2-201ENST00000456090 MINPP1Q9UNW1 487 aa15.81■□□□□ 0.12
SMCR2-201ENST00000456090 WTIPA6NIX2 430 aaPredicted RBP15.8■□□□□ 0.12
SMCR2-201ENST00000456090 F6X3S4 739 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 FOXN1O15353 648 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 CASP7P55210 303 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 CDC37L1Q7L3B6 337 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 TNS4Q8IZW8 715 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 AIDAQ96BJ3 306 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 ZNF408Q9H9D4 720 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 TLL2Q9Y6L7 1015 aa15.8■□□□□ 0.12
SMCR2-201ENST00000456090 ITGA6P23229 1130 aa15.79■□□□□ 0.12
SMCR2-201ENST00000456090 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
SMCR2-201ENST00000456090 GRM1Q13255 1194 aa15.79■□□□□ 0.12
SMCR2-201ENST00000456090 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
SMCR2-201ENST00000456090 RBM26Q5T8P6 1007 aaKnown RBP15.79■□□□□ 0.12
SMCR2-201ENST00000456090 CYP4F22Q6NT55 531 aa15.79■□□□□ 0.12
SMCR2-201ENST00000456090 WBP1LQ9NX94 342 aa15.79■□□□□ 0.12
SMCR2-201ENST00000456090 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
SMCR2-201ENST00000456090 ECE1P42892 770 aa15.78■□□□□ 0.12
SMCR2-201ENST00000456090 CCT4P50991 539 aaKnown RBP15.78■□□□□ 0.12
SMCR2-201ENST00000456090 SAPCD2Q86UD0 394 aa15.78■□□□□ 0.12
SMCR2-201ENST00000456090 USP48Q86UV5 1035 aa15.78■□□□□ 0.12
SMCR2-201ENST00000456090 CAPNS2Q96L46 248 aa15.78■□□□□ 0.12
SMCR2-201ENST00000456090 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 CSF1RP07333 972 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 KIF4BQ2VIQ3 1234 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 RSBN1LQ6PCB5 846 aaPredicted RBP15.77■□□□□ 0.12
SMCR2-201ENST00000456090 PODNQ7Z5L7 613 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 AGBL3Q8NEM8 1001 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
SMCR2-201ENST00000456090 ZNF609O15014 1411 aa15.77■□□□□ 0.11
SMCR2-201ENST00000456090 USP17L3A6NCW0 530 aa15.76■□□□□ 0.11
SMCR2-201ENST00000456090 USP17L4A6NCW7 530 aa15.76■□□□□ 0.11
SMCR2-201ENST00000456090 CTCFP49711 727 aaPredicted RBP15.76■□□□□ 0.11
SMCR2-201ENST00000456090 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
SMCR2-201ENST00000456090 DLK2Q6UY11 383 aa15.76■□□□□ 0.11
SMCR2-201ENST00000456090 USP17L1Q7RTZ2 530 aa15.76■□□□□ 0.11
SMCR2-201ENST00000456090 KRT26Q7Z3Y9 468 aa15.76■□□□□ 0.11
SMCR2-201ENST00000456090 DCPSQ96C86 337 aaKnown RBP15.76■□□□□ 0.11
SMCR2-201ENST00000456090 LEMD3Q9Y2U8 911 aa15.75■□□□□ 0.11
SMCR2-201ENST00000456090 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
SMCR2-201ENST00000456090 ZNF804BA4D1E1 1349 aa15.74■□□□□ 0.11
SMCR2-201ENST00000456090 ANKRD18BA2A2Z9 1011 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms