RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 PSMD14O00487 310 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 ECE2O60344 883 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 FKBP5Q13451 457 aaPredicted RBP15.29■□□□□ 0.04
PDGFB-204ENST00000455790 TNIP1Q15025 636 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 TTLL11Q8NHH1 800 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
PDGFB-204ENST00000455790 SCN9AQ15858 1988 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 WTIPA6NIX2 430 aaPredicted RBP15.28■□□□□ 0.04
PDGFB-204ENST00000455790 H7C1W4 665 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 HIRAP54198 1017 aaPredicted RBP15.28■□□□□ 0.04
PDGFB-204ENST00000455790 GCKRQ14397 625 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 COL13A1Q5TAT6 717 aaPredicted RBP15.28■□□□□ 0.04
PDGFB-204ENST00000455790 ANKRD18AQ8IVF6 992 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 DNAAF4Q8WXU2 420 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 ANKIB1Q9P2G1 1089 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 SPEF2Q9C093 1822 aa15.28■□□□□ 0.04
PDGFB-204ENST00000455790 ZNF521Q96K83 1311 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 F6X3S4 739 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 EGFRP00533 1210 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 VEGFBP49765 207 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 CASP7P55210 303 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 EYA3Q99504 573 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
PDGFB-204ENST00000455790 GGA1Q9UJY5 639 aa15.27■□□□□ 0.04
PDGFB-204ENST00000455790 MYH3P11055 1940 aa15.27■□□□□ 0.03
PDGFB-204ENST00000455790 FAM161AQ3B820 660 aa15.26■□□□□ 0.03
PDGFB-204ENST00000455790 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
PDGFB-204ENST00000455790 GLIS2Q9BZE0 524 aaPredicted RBP15.26■□□□□ 0.03
PDGFB-204ENST00000455790 XDHP47989 1333 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 RASSF10A6NK89 507 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 CST9Q5W186 159 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 LINS1Q8NG48 757 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 ZC3H12CQ9C0D7 883 aaKnown RBP15.25■□□□□ 0.03
PDGFB-204ENST00000455790 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
PDGFB-204ENST00000455790 ABT1Q9ULW3 272 aaKnown RBP15.25■□□□□ 0.03
PDGFB-204ENST00000455790 DLK2Q6UY11 383 aa15.24■□□□□ 0.03
PDGFB-204ENST00000455790 DPF2Q92785 391 aa15.24■□□□□ 0.03
PDGFB-204ENST00000455790 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
PDGFB-204ENST00000455790 PGAP2Q9UHJ9 254 aa15.24■□□□□ 0.03
PDGFB-204ENST00000455790 MINPP1Q9UNW1 487 aa15.24■□□□□ 0.03
PDGFB-204ENST00000455790 H7C1D1 291 aa15.23■□□□□ 0.03
PDGFB-204ENST00000455790 TBC1D10BQ4KMP7 808 aaPredicted RBP15.23■□□□□ 0.03
PDGFB-204ENST00000455790 BEND3Q5T5X7 828 aa15.23■□□□□ 0.03
PDGFB-204ENST00000455790 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
PDGFB-204ENST00000455790 VIL1P09327 827 aaKnown RBP15.22■□□□□ 0.03
PDGFB-204ENST00000455790 ITGA6P23229 1130 aa15.22■□□□□ 0.03
PDGFB-204ENST00000455790 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
PDGFB-204ENST00000455790 RPS12P25398 132 aaKnown RBP15.22■□□□□ 0.03
PDGFB-204ENST00000455790 DEFB115Q30KQ5 88 aa15.22■□□□□ 0.03
PDGFB-204ENST00000455790 TRPM7Q96QT4 1865 aa15.22■□□□□ 0.03
PDGFB-204ENST00000455790 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
PDGFB-204ENST00000455790 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.03
PDGFB-204ENST00000455790 ZNF609O15014 1411 aa15.21■□□□□ 0.03
PDGFB-204ENST00000455790 FOXN1O15353 648 aa15.21■□□□□ 0.03
PDGFB-204ENST00000455790 CELF2O95319 508 aaKnown RBP15.21■□□□□ 0.03
PDGFB-204ENST00000455790 CSF1RP07333 972 aa15.21■□□□□ 0.03
PDGFB-204ENST00000455790 ZC3H15Q8WU90 426 aaKnown RBP15.21■□□□□ 0.03
PDGFB-204ENST00000455790 MED23Q9ULK4 1368 aa15.21■□□□□ 0.02
PDGFB-204ENST00000455790 ASTN2O75129 1339 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-204ENST00000455790 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
PDGFB-204ENST00000455790 PSME4Q14997 1843 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 G3V3G9 751 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 KLRK1P26718 216 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 CCT4P50991 539 aaKnown RBP15.2■□□□□ 0.02
PDGFB-204ENST00000455790 FOXO4P98177 505 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
PDGFB-204ENST00000455790 DCAF8Q5TAQ9 597 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 TLL2Q9Y6L7 1015 aa15.2■□□□□ 0.02
PDGFB-204ENST00000455790 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
PDGFB-204ENST00000455790 ADM5C9JUS6 153 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
PDGFB-204ENST00000455790 GRM1Q13255 1194 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 KIF4BQ2VIQ3 1234 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 CYP4F22Q6NT55 531 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 RSBN1LQ6PCB5 846 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-204ENST00000455790 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
PDGFB-204ENST00000455790 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 TXNRD3Q86VQ6 643 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 CAPNS2Q96L46 248 aa15.19■□□□□ 0.02
PDGFB-204ENST00000455790 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
PDGFB-204ENST00000455790 SAPCD2Q86UD0 394 aa15.18■□□□□ 0.02
PDGFB-204ENST00000455790 GMLQ99445 158 aa15.18■□□□□ 0.02
PDGFB-204ENST00000455790 MXD3Q9BW11 206 aa15.18■□□□□ 0.02
PDGFB-204ENST00000455790 WBP1LQ9NX94 342 aa15.18■□□□□ 0.02
PDGFB-204ENST00000455790 SNAP23O00161 211 aa15.17■□□□□ 0.02
PDGFB-204ENST00000455790 GRM8O00222 908 aa15.17■□□□□ 0.02
PDGFB-204ENST00000455790 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
PDGFB-204ENST00000455790 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
PDGFB-204ENST00000455790 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
PDGFB-204ENST00000455790 GGA3Q9NZ52 723 aa15.17■□□□□ 0.02
PDGFB-204ENST00000455790 A0A1B0GUL6 1792 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 USP17L3A6NCW0 530 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 USP17L4A6NCW7 530 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 CHRNDQ07001 517 aa15.16■□□□□ 0.02
PDGFB-204ENST00000455790 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms