RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
SMPD4-214ENST00000455548 IFIT5Q13325 482 aaKnown RBP20.51■□□□□ 0.87
SMPD4-214ENST00000455548 LMBR1LQ6UX01 489 aa20.51■□□□□ 0.87
SMPD4-214ENST00000455548 CHMP3Q9Y3E7 222 aa20.51■□□□□ 0.87
SMPD4-214ENST00000455548 UFL1O94874 794 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 CCT4P50991 539 aaKnown RBP20.5■□□□□ 0.87
SMPD4-214ENST00000455548 FSTL1Q12841 308 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 ARHGAP45Q92619 1136 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 MPHOSPH8Q99549 860 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 MINPP1Q9UNW1 487 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 GJA3Q9Y6H8 435 aa20.5■□□□□ 0.87
SMPD4-214ENST00000455548 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
SMPD4-214ENST00000455548 ATP2B4P23634 1241 aa20.49■□□□□ 0.87
SMPD4-214ENST00000455548 EPHA10Q5JZY3 1008 aa20.49■□□□□ 0.87
SMPD4-214ENST00000455548 ZC3H12CQ9C0D7 883 aaKnown RBP20.49■□□□□ 0.87
SMPD4-214ENST00000455548 RIMBP2O15034 1052 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 TNIP1Q15025 636 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 CCDC57Q2TAC2 916 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 HACL1Q9UJ83 578 aa20.48■□□□□ 0.87
SMPD4-214ENST00000455548 IPO8O15397 1037 aaKnown RBP20.47■□□□□ 0.87
SMPD4-214ENST00000455548 CXCL9Q07325 125 aa20.47■□□□□ 0.87
SMPD4-214ENST00000455548 CIAPIN1Q6FI81 312 aa20.47■□□□□ 0.87
SMPD4-214ENST00000455548 ANKRD2Q9GZV1 360 aa20.47■□□□□ 0.87
SMPD4-214ENST00000455548 USP44Q9H0E7 712 aa20.47■□□□□ 0.87
SMPD4-214ENST00000455548 TAF1DQ9H5J8 278 aaPredicted RBP20.47■□□□□ 0.87
SMPD4-214ENST00000455548 LMOD1P29536 600 aaPredicted RBP20.46■□□□□ 0.87
SMPD4-214ENST00000455548 G3V3G9 751 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 ECE2O60344 883 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 HSPA6P17066 643 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 TAF7LQ5H9L4 462 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 DCAF8Q5TAQ9 597 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 GPR101Q96P66 508 aaPredicted RBP20.45■□□□□ 0.86
SMPD4-214ENST00000455548 DBNDD1Q9H9R9 158 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 LEMD3Q9Y2U8 911 aa20.45■□□□□ 0.86
SMPD4-214ENST00000455548 YDJCA8MPS7 323 aa20.44■□□□□ 0.86
SMPD4-214ENST00000455548 RAD17O75943 681 aa20.44■□□□□ 0.86
SMPD4-214ENST00000455548 BICC1Q9H694 974 aaKnown RBP20.44■□□□□ 0.86
SMPD4-214ENST00000455548 BCAR3O75815 825 aa20.43■□□□□ 0.86
SMPD4-214ENST00000455548 EPHX2P34913 555 aa20.43■□□□□ 0.86
SMPD4-214ENST00000455548 DOK7Q18PE1 504 aa20.43■□□□□ 0.86
SMPD4-214ENST00000455548 RABL6Q3YEC7 729 aaPredicted RBP20.43■□□□□ 0.86
SMPD4-214ENST00000455548 PNMA8AQ86V59 439 aaPredicted RBP20.43■□□□□ 0.86
SMPD4-214ENST00000455548 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
SMPD4-214ENST00000455548 MED23Q9ULK4 1368 aa20.43■□□□□ 0.86
SMPD4-214ENST00000455548 SCNN1DP51172 638 aa20.42■□□□□ 0.86
SMPD4-214ENST00000455548 CHRNDQ07001 517 aa20.42■□□□□ 0.86
SMPD4-214ENST00000455548 ATF7IPQ6VMQ6 1270 aa20.42■□□□□ 0.86
SMPD4-214ENST00000455548 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
SMPD4-214ENST00000455548 LDHDQ86WU2 507 aa20.42■□□□□ 0.86
SMPD4-214ENST00000455548 FRAT1Q92837 279 aaPredicted RBP20.42■□□□□ 0.86
SMPD4-214ENST00000455548 A0A1B0GUL6 1792 aa20.41■□□□□ 0.86
SMPD4-214ENST00000455548 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-214ENST00000455548 GMPSP49915 693 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-214ENST00000455548 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
SMPD4-214ENST00000455548 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
SMPD4-214ENST00000455548 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
SMPD4-214ENST00000455548 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
SMPD4-214ENST00000455548 ZNF804BA4D1E1 1349 aa20.4■□□□□ 0.86
SMPD4-214ENST00000455548 KCNJ4P48050 445 aa20.4■□□□□ 0.86
SMPD4-214ENST00000455548 SCN9AQ15858 1988 aa20.4■□□□□ 0.86
SMPD4-214ENST00000455548 EAPPQ56P03 285 aaPredicted RBP20.4■□□□□ 0.86
SMPD4-214ENST00000455548 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
SMPD4-214ENST00000455548 GPRC5DQ9NZD1 345 aa20.4■□□□□ 0.86
SMPD4-214ENST00000455548 PSME4Q14997 1843 aa20.39■□□□□ 0.86
SMPD4-214ENST00000455548 PSMD14O00487 310 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 POTEIP0CG38 1075 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 POTEJP0CG39 1038 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 TRIM27P14373 513 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 EPS15P42566 896 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 APLP1P51693 650 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.85
SMPD4-214ENST00000455548 CEP350Q5VT06 3117 aa20.38■□□□□ 0.85
SMPD4-214ENST00000455548 WTIPA6NIX2 430 aaPredicted RBP20.38■□□□□ 0.85
SMPD4-214ENST00000455548 RPS12P25398 132 aaKnown RBP20.38■□□□□ 0.85
SMPD4-214ENST00000455548 ZKSCAN2Q63HK3 967 aa20.38■□□□□ 0.85
SMPD4-214ENST00000455548 PODNQ7Z5L7 613 aa20.38■□□□□ 0.85
SMPD4-214ENST00000455548 DPF2Q92785 391 aa20.38■□□□□ 0.85
SMPD4-214ENST00000455548 ADARB2Q9NS39 739 aaKnown RBP20.38■□□□□ 0.85
SMPD4-214ENST00000455548 GNAI3P08754 354 aa20.37■□□□□ 0.85
SMPD4-214ENST00000455548 USP50Q70EL3 339 aaPredicted RBP20.37■□□□□ 0.85
SMPD4-214ENST00000455548 HELBQ8NG08 1087 aaPredicted RBP20.37■□□□□ 0.85
SMPD4-214ENST00000455548 KCNQ5Q9NR82 932 aa20.37■□□□□ 0.85
SMPD4-214ENST00000455548 CLEC11AQ9Y240 323 aa20.37■□□□□ 0.85
SMPD4-214ENST00000455548 VIL1P09327 827 aaKnown RBP20.36■□□□□ 0.85
SMPD4-214ENST00000455548 COA1Q9GZY4 146 aa20.36■□□□□ 0.85
SMPD4-214ENST00000455548 CNOT7Q9UIV1 285 aaKnown RBP20.36■□□□□ 0.85
SMPD4-214ENST00000455548 H7C1D1 291 aa20.35■□□□□ 0.85
SMPD4-214ENST00000455548 TAF5LO75529 589 aa20.35■□□□□ 0.85
SMPD4-214ENST00000455548 C15orf52Q6ZUT6 534 aaKnown RBP20.35■□□□□ 0.85
SMPD4-214ENST00000455548 MEIS3Q99687 375 aa20.35■□□□□ 0.85
SMPD4-214ENST00000455548 ZBTB12Q9Y330 459 aaPredicted RBP20.35■□□□□ 0.85
SMPD4-214ENST00000455548 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
SMPD4-214ENST00000455548 USP17L3A6NCW0 530 aa20.34■□□□□ 0.85
SMPD4-214ENST00000455548 USP17L4A6NCW7 530 aa20.34■□□□□ 0.85
SMPD4-214ENST00000455548 PLIN1O60240 522 aa20.34■□□□□ 0.85
SMPD4-214ENST00000455548 USP17L1Q7RTZ2 530 aa20.34■□□□□ 0.85
SMPD4-214ENST00000455548 TXNRD3Q86VQ6 643 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms