RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 C7orf43Q8WVR3 580 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
SYPL1-202ENST00000455385 APBB1O00213 710 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 CIAO1O76071 339 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 G3BP1Q13283 466 aaKnown RBP eCLIP13.32□□□□□ -0.28
SYPL1-202ENST00000455385 SMC5Q8IY18 1101 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
SYPL1-202ENST00000455385 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
SYPL1-202ENST00000455385 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
SYPL1-202ENST00000455385 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 TAF5LO75529 589 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
SYPL1-202ENST00000455385 CHRNDQ07001 517 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
SYPL1-202ENST00000455385 ATP6V0A2Q9Y487 856 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 LRP5O75197 1615 aa13.31□□□□□ -0.28
SYPL1-202ENST00000455385 BRCA1P38398 1863 aaKnown RBP13.31□□□□□ -0.28
SYPL1-202ENST00000455385 SNAP23O00161 211 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 TFCP2Q12800 502 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 VGLL2Q8N8G2 317 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 C21orf2O43822 256 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 OS9Q13438 667 aaPredicted RBP13.3□□□□□ -0.28
SYPL1-202ENST00000455385 RHPN1Q8TCX5 695 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
SYPL1-202ENST00000455385 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
SYPL1-202ENST00000455385 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
SYPL1-202ENST00000455385 GPSM2P81274 684 aa13.29□□□□□ -0.28
SYPL1-202ENST00000455385 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
SYPL1-202ENST00000455385 DALRD3Q5D0E6 543 aaKnown RBP13.29□□□□□ -0.28
SYPL1-202ENST00000455385 METTL24Q5JXM2 366 aa13.29□□□□□ -0.28
SYPL1-202ENST00000455385 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 ANKRD45Q5TZF3 282 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 CEP126Q9P2H0 1117 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 PDE8BO95263 885 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
SYPL1-202ENST00000455385 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
SYPL1-202ENST00000455385 CENPQQ7L2Z9 268 aaPredicted RBP13.27□□□□□ -0.28
SYPL1-202ENST00000455385 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.28
SYPL1-202ENST00000455385 BCL11AQ9H165 835 aa13.27□□□□□ -0.28
SYPL1-202ENST00000455385 TIMM10P62072 90 aa13.27□□□□□ -0.29
SYPL1-202ENST00000455385 NUCB1Q02818 461 aa13.27□□□□□ -0.29
SYPL1-202ENST00000455385 ERC1Q8IUD2 1116 aa13.27□□□□□ -0.29
SYPL1-202ENST00000455385 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
SYPL1-202ENST00000455385 ANKIB1Q9P2G1 1089 aa13.27□□□□□ -0.29
SYPL1-202ENST00000455385 LRRC37AA6NMS7 1700 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 FGFR2P21802 821 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
SYPL1-202ENST00000455385 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 POLLQ9UGP5 575 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
SYPL1-202ENST00000455385 MPNDQ8N594 471 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 XDHP47989 1333 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 TBC1D16Q8TBP0 767 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 GPR101Q96P66 508 aaPredicted RBP13.25□□□□□ -0.29
SYPL1-202ENST00000455385 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
SYPL1-202ENST00000455385 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.291e-7■□□□□ 9.9
SYPL1-202ENST00000455385 KLRK1P26718 216 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 TXNRD3Q86VQ6 643 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 CCDC8Q9H0W5 538 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-202ENST00000455385 GPR108Q9NPR9 543 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 UTRNP46939 3433 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 PUM3Q15397 648 aaKnown RBP13.24□□□□□ -0.29
SYPL1-202ENST00000455385 ATP2B3Q16720 1220 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 CC2D2BQ6DHV5 1058 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-202ENST00000455385 OTUD7AQ8TE49 926 aaPredicted RBP13.24□□□□□ -0.29
SYPL1-202ENST00000455385 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
SYPL1-202ENST00000455385 LEMD3Q9Y2U8 911 aa13.24□□□□□ -0.29
SYPL1-202ENST00000455385 IRS2Q9Y4H2 1338 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 ATP2B4P23634 1241 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 ADORA1P30542 326 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 AACSQ86V21 672 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 CLASRPQ8N2M8 674 aaKnown RBP13.23□□□□□ -0.29
SYPL1-202ENST00000455385 LPIN2Q92539 896 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 NEUROD6Q96NK8 337 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
SYPL1-202ENST00000455385 TMX4Q9H1E5 349 aaPredicted RBP13.23□□□□□ -0.29
SYPL1-202ENST00000455385 GGA1Q9UJY5 639 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 AKAP2Q9Y2D5 859 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 DUOX1Q9NRD9 1551 aa13.23□□□□□ -0.29
SYPL1-202ENST00000455385 C6orf229H3BNL8 230 aa13.22□□□□□ -0.29
SYPL1-202ENST00000455385 UFL1O94874 794 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms