RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RTFDC1Q9BY42 306 aaPredicted RBP17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 RIPOR2Q9Y4F9 1068 aa17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 XDHP47989 1333 aa17.77■□□□□ 0.44
HMGXB4-204ENST00000455359 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 TAOK3Q9H2K8 898 aa17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 LEMD3Q9Y2U8 911 aa17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
HMGXB4-204ENST00000455359 ATP2B4P23634 1241 aa17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 HSP90AB4PQ58FF6 505 aa17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 ANKIB1Q9P2G1 1089 aa17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
HMGXB4-204ENST00000455359 NEFLP07196 543 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 GPSM2P81274 684 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 CHRNDQ07001 517 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 G3BP1Q13283 466 aaKnown RBP eCLIP17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 SIRT2Q8IXJ6 389 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 MYH3P11055 1940 aa17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 BRCA1P38398 1863 aaKnown RBP17.74■□□□□ 0.43
HMGXB4-204ENST00000455359 NFKBIEO00221 500 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 LRRC24Q50LG9 513 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 OLFM4Q6UX06 510 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 ATG9AQ7Z3C6 839 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 ERC1Q8IUD2 1116 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 EYA3Q99504 573 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 GGA1Q9UJY5 639 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 SLX4Q8IY92 1834 aa17.73■□□□□ 0.43
HMGXB4-204ENST00000455359 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 METTL24Q5JXM2 366 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 TBC1D16Q8TBP0 767 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 PA2G4Q9UQ80 394 aaKnown RBP17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 PDE8BO95263 885 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 HDAC1Q13547 482 aaPredicted RBP17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 UBE4AQ14139 1066 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 VGLL2Q8N8G2 317 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 SIL1Q9H173 461 aa17.72■□□□□ 0.43
HMGXB4-204ENST00000455359 RAB11FIP3O75154 756 aa17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 UFL1O94874 794 aa17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 LMNB1P20700 586 aa17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 KCNJ4P48050 445 aa17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 C15orf52Q6ZUT6 534 aaKnown RBP17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 POLLQ9UGP5 575 aa17.71■□□□□ 0.42
HMGXB4-204ENST00000455359 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 COL4A1P02462 1669 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 KIAA2012Q0VF49 1180 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 PUM3Q15397 648 aaKnown RBP17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 WASHC4Q2M389 1173 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 RWDD1Q9H446 243 aaPredicted RBP17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
HMGXB4-204ENST00000455359 ARFGEF1Q9Y6D6 1849 aa17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 IARSP41252 1262 aaKnown RBP17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 OS9Q13438 667 aaPredicted RBP17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 ZC3H12CQ9C0D7 883 aaKnown RBP17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 GOLGB1Q14789 3259 aaKnown RBP17.69■□□□□ 0.42
HMGXB4-204ENST00000455359 LRRC37AA6NMS7 1700 aa17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 TAF5LO75529 589 aa17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 LPIN2Q92539 896 aa17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
HMGXB4-204ENST00000455359 PPIP5K2O43314 1243 aa17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 IFIT1P09914 478 aaKnown RBP17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 FGFR2P21802 821 aa17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 RASSF7Q02833 373 aa17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
HMGXB4-204ENST00000455359 SASH1O94885 1247 aa17.66■□□□□ 0.42
HMGXB4-204ENST00000455359 TFCP2Q12800 502 aa17.66■□□□□ 0.42
HMGXB4-204ENST00000455359 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
HMGXB4-204ENST00000455359 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
HMGXB4-204ENST00000455359 EXOC6BQ9Y2D4 811 aa17.66■□□□□ 0.42
HMGXB4-204ENST00000455359 SLC5A1P13866 664 aa17.65■□□□□ 0.42
HMGXB4-204ENST00000455359 ATP2B3Q16720 1220 aa17.65■□□□□ 0.42
HMGXB4-204ENST00000455359 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
HMGXB4-204ENST00000455359 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
HMGXB4-204ENST00000455359 COA1Q9GZY4 146 aa17.65■□□□□ 0.42
HMGXB4-204ENST00000455359 IRS2Q9Y4H2 1338 aa17.64■□□□□ 0.41
HMGXB4-204ENST00000455359 ZBTB22O15209 634 aa17.64■□□□□ 0.41
HMGXB4-204ENST00000455359 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
HMGXB4-204ENST00000455359 DUOX1Q9NRD9 1551 aa17.64■□□□□ 0.41
HMGXB4-204ENST00000455359 PRELPP51888 382 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 AOC3Q16853 763 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 CAVIN4Q5BKX8 364 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 ZNF804AQ7Z570 1209 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 PODNQ7Z5L7 613 aa17.63■□□□□ 0.41
HMGXB4-204ENST00000455359 NIM1KQ8IY84 436 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms