RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PDE8BO95263 885 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 PUM3Q15397 648 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 TMC4Q7Z404 712 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 KBTBD3Q8NAB2 608 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 LPIN2Q92539 896 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 SIL1Q9H173 461 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 PDS5AQ29RF7 1337 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 AKAP11Q9UKA4 1901 aa8.26□□□□□ -1.09
ECHDC1-210ENST00000454859 A0A1B0GUL7 405 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 GPTP24298 496 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 RXRBP28702 533 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 HSPA4P34932 840 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 VGLL2Q8N8G2 317 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 ARXQ96QS3 562 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 NRXN2Q9P2S2 1712 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 DOCK2Q92608 1830 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 SEMA3EO15041 775 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 GNPATO15228 680 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 SLC5A1P13866 664 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 RFC4P35249 363 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 ATP2B3Q16720 1220 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 KIF2CQ99661 725 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 GREM2Q9H772 168 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 CNNM1Q9NRU3 951 aa8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 BSDC1Q9NW68 430 aaPredicted RBP8.25□□□□□ -1.09
ECHDC1-210ENST00000454859 MED23Q9ULK4 1368 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 FGFR2P21802 821 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 ARID4AP29374 1257 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 UBE4AQ14139 1066 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 KRT32Q14532 448 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 METTL24Q5JXM2 366 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 MPHOSPH8Q99549 860 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.24□□□□□ -1.095e-9■■■■■ 28.9
ECHDC1-210ENST00000454859 ANKRD2Q9GZV1 360 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 CCDC8Q9H0W5 538 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 CWC22Q9HCG8 908 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 IFIT1P09914 478 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 GORABQ5T7V8 394 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 FSD1Q9BTV5 496 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 LSG1Q9H089 658 aaKnown RBP8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 PAG1Q9NWQ8 432 aa8.24□□□□□ -1.09
ECHDC1-210ENST00000454859 RPAP1Q9BWH6 1393 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 KIAA1551Q9HCM1 1747 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 ZKSCAN1P17029 563 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 PSMA5P28066 241 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 USPL1Q5W0Q7 1092 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 ANKRD18AQ8IVF6 992 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 ARHGEF1Q92888 912 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 XAGE2Q96GT9 111 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 BCL2L12Q9HB09 334 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 CCDC171Q6TFL3 1326 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 PTMSP20962 102 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 NT5C2P49902 561 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 LRRC24Q50LG9 513 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 TTC39AQ5SRH9 613 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 KLHDC4Q8TBB5 520 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 MAP4K1Q92918 833 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 DSCC1Q9BVC3 393 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 ANO2Q9NQ90 1003 aa8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 GNL3LQ9NVN8 582 aaKnown RBP8.23□□□□□ -1.09
ECHDC1-210ENST00000454859 C15orf52Q6ZUT6 534 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-210ENST00000454859 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
ECHDC1-210ENST00000454859 INTS4Q96HW7 963 aaKnown RBP8.22□□□□□ -1.09
ECHDC1-210ENST00000454859 NEUROD6Q96NK8 337 aa8.22□□□□□ -1.09
ECHDC1-210ENST00000454859 MYH13Q9UKX3 1938 aa8.22□□□□□ -1.09
ECHDC1-210ENST00000454859 RNF113AO15541 343 aaKnown RBP8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 HMGB1P09429 215 aaKnown RBP8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 GTF2E1P29083 439 aaPredicted RBP8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 TBC1D9BQ66K14 1250 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 NLGN1Q8N2Q7 840 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 BOLA2Q9H3K6 86 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 CTNNA3Q9UI47 895 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 LRRC37AA6NMS7 1700 aa8.21□□□□□ -1.09
ECHDC1-210ENST00000454859 ZMYM6O95789 1325 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 TM4SF1P30408 202 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 ST5P78524 1137 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 NECTIN1Q15223 517 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 ANKRD1Q15327 319 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 UBE3CQ15386 1083 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 TXNRD1Q16881 649 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 ZNF804BA4D1E1 1349 aa8.21□□□□□ -1.1
ECHDC1-210ENST00000454859 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 CWC27Q6UX04 472 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 DDX46Q7L014 1031 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-210ENST00000454859 ZNF594Q96JF6 807 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms