RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
USP41-202ENST00000454608 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
USP41-202ENST00000454608 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
USP41-202ENST00000454608 GPR25O00155 361 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 TM4SF4P48230 202 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 ZNF280AP59817 542 aaPredicted RBP13.69□□□□□ -0.22
USP41-202ENST00000454608 GPSM2P81274 684 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 DOK7Q18PE1 504 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 ANGEL2Q5VTE6 544 aaKnown RBP13.69□□□□□ -0.22
USP41-202ENST00000454608 AGBL3Q8NEM8 1001 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 CELF1Q92879 486 aaKnown RBP13.69□□□□□ -0.22
USP41-202ENST00000454608 PNNQ9H307 717 aaKnown RBP13.69□□□□□ -0.22
USP41-202ENST00000454608 KCNQ5Q9NR82 932 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 BABAM1Q9NWV8 329 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
USP41-202ENST00000454608 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
USP41-202ENST00000454608 G3V3G9 751 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 SCARF1Q14162 830 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 HABP4Q5JVS0 413 aaKnown RBP13.68□□□□□ -0.22
USP41-202ENST00000454608 DCAF8Q5TAQ9 597 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 TBC1D16Q8TBP0 767 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 PLEKHF1Q96S99 279 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 CFHR5Q9BXR6 569 aa13.68□□□□□ -0.22
USP41-202ENST00000454608 ASTN2O75129 1339 aaPredicted RBP13.67□□□□□ -0.22
USP41-202ENST00000454608 ANXA1P04083 346 aa13.67□□□□□ -0.22
USP41-202ENST00000454608 SREBF2Q12772 1141 aa13.67□□□□□ -0.22
USP41-202ENST00000454608 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
USP41-202ENST00000454608 RSBN1LQ6PCB5 846 aaPredicted RBP13.67□□□□□ -0.22
USP41-202ENST00000454608 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
USP41-202ENST00000454608 PODXL2Q9NZ53 605 aa13.67□□□□□ -0.22
USP41-202ENST00000454608 FKTNO75072 461 aa13.66□□□□□ -0.22
USP41-202ENST00000454608 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
USP41-202ENST00000454608 MAPK8IP3Q9UPT6 1336 aa13.65□□□□□ -0.22
USP41-202ENST00000454608 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
USP41-202ENST00000454608 RPS8P62241 208 aaKnown RBP13.65□□□□□ -0.22
USP41-202ENST00000454608 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
USP41-202ENST00000454608 UBE2Q2LH0YL09 131 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 ALDH1A1P00352 501 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 NF2P35240 595 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 PLBD2Q8NHP8 589 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
USP41-202ENST00000454608 FAM89AQ96GI7 184 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 ISCA1Q9BUE6 129 aa13.64□□□□□ -0.23
USP41-202ENST00000454608 COL4A1P02462 1669 aa13.63□□□□□ -0.23
USP41-202ENST00000454608 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
USP41-202ENST00000454608 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
USP41-202ENST00000454608 GMLQ99445 158 aa13.63□□□□□ -0.23
USP41-202ENST00000454608 ANKIB1Q9P2G1 1089 aa13.63□□□□□ -0.23
USP41-202ENST00000454608 GGA1Q9UJY5 639 aa13.63□□□□□ -0.23
USP41-202ENST00000454608 LAMB1P07942 1786 aa13.63□□□□□ -0.23
USP41-202ENST00000454608 UFL1O94874 794 aa13.62□□□□□ -0.23
USP41-202ENST00000454608 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
USP41-202ENST00000454608 MOB2Q70IA6 237 aa13.62□□□□□ -0.23
USP41-202ENST00000454608 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
USP41-202ENST00000454608 USP17L3A6NCW0 530 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 USP17L4A6NCW7 530 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 IRS4O14654 1257 aaPredicted RBP13.61□□□□□ -0.23
USP41-202ENST00000454608 MMP14P50281 582 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 INHBEP58166 350 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
USP41-202ENST00000454608 USP17L1Q7RTZ2 530 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
USP41-202ENST00000454608 KIAA0100Q14667 2235 aaKnown RBP13.6□□□□□ -0.23
USP41-202ENST00000454608 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
USP41-202ENST00000454608 FXR1P51114 621 aaKnown RBP eCLIP13.59□□□□□ -0.23
USP41-202ENST00000454608 RIPK4P57078 832 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 CHPF2Q9P2E5 772 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 ZNF646O15015 1829 aaPredicted RBP13.59□□□□□ -0.23
USP41-202ENST00000454608 XDHP47989 1333 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 MYO3BQ8WXR4 1341 aa13.59□□□□□ -0.23
USP41-202ENST00000454608 POTEFA5A3E0 1075 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 MANSC4A6NHS7 340 aaPredicted RBP13.58□□□□□ -0.24
USP41-202ENST00000454608 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 HOXB7P09629 217 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 ATP2B4P23634 1241 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
USP41-202ENST00000454608 NBPF9Q3BBW0 867 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 SPRYD7Q5W111 196 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
USP41-202ENST00000454608 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
USP41-202ENST00000454608 DBF4Q9UBU7 674 aaPredicted RBP13.58□□□□□ -0.24
USP41-202ENST00000454608 WNT10BO00744 389 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
USP41-202ENST00000454608 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
USP41-202ENST00000454608 LDLRAD1Q5T700 205 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 APOBEC3FQ8IUX4 373 aaKnown RBP13.57□□□□□ -0.24
USP41-202ENST00000454608 ERO1AQ96HE7 468 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 R3HDMLQ9H3Y0 253 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 SEC31BQ9NQW1 1179 aa13.57□□□□□ -0.24
USP41-202ENST00000454608 SCAF8Q9UPN6 1271 aaKnown RBP13.57□□□□□ -0.24
USP41-202ENST00000454608 COL1A1P02452 1464 aaPredicted RBP13.56□□□□□ -0.24
USP41-202ENST00000454608 ZBTB48P10074 688 aaPredicted RBP13.56□□□□□ -0.24
USP41-202ENST00000454608 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms