RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NPHP1O15259 732 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
SCN9A-205ENST00000454569 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 IL1RAPL2Q9NP60 686 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
SCN9A-205ENST00000454569 CCDC57Q2TAC2 916 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
SCN9A-205ENST00000454569 KIF13BQ9NQT8 1826 aa13.61□□□□□ -0.23
SCN9A-205ENST00000454569 LRP5O75197 1615 aa13.61□□□□□ -0.23
SCN9A-205ENST00000454569 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
SCN9A-205ENST00000454569 CCDC152Q4G0S7 254 aa13.61□□□□□ -0.23
SCN9A-205ENST00000454569 SLC16A10Q8TF71 515 aa13.61□□□□□ -0.23
SCN9A-205ENST00000454569 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 KIAA1551Q9HCM1 1747 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 EYA2O00167 538 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 RGS3P49796 1198 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 ST5P78524 1137 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 TFCP2Q12800 502 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 RIPOR2Q9Y4F9 1068 aa13.6□□□□□ -0.23
SCN9A-205ENST00000454569 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
SCN9A-205ENST00000454569 KLRG2A4D1S0 409 aaPredicted RBP13.59□□□□□ -0.23
SCN9A-205ENST00000454569 WTIPA6NIX2 430 aaPredicted RBP13.59□□□□□ -0.23
SCN9A-205ENST00000454569 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
SCN9A-205ENST00000454569 CRY2Q49AN0 593 aa13.59□□□□□ -0.23
SCN9A-205ENST00000454569 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
SCN9A-205ENST00000454569 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
SCN9A-205ENST00000454569 LRRCC1Q9C099 1032 aa13.59□□□□□ -0.23
SCN9A-205ENST00000454569 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
SCN9A-205ENST00000454569 SNAP23O00161 211 aa13.58□□□□□ -0.23
SCN9A-205ENST00000454569 OS9Q13438 667 aaPredicted RBP13.58□□□□□ -0.23
SCN9A-205ENST00000454569 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.23
SCN9A-205ENST00000454569 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.23
SCN9A-205ENST00000454569 BRIP1Q9BX63 1249 aa13.58□□□□□ -0.23
SCN9A-205ENST00000454569 DLEC1Q9Y238 1755 aa13.58□□□□□ -0.24
SCN9A-205ENST00000454569 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
SCN9A-205ENST00000454569 PTGER2P43116 358 aa13.58□□□□□ -0.24
SCN9A-205ENST00000454569 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
SCN9A-205ENST00000454569 MTFR1LQ9H019 292 aa13.58□□□□□ -0.24
SCN9A-205ENST00000454569 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
SCN9A-205ENST00000454569 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 CIAO1O76071 339 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 SRGNP10124 158 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 HSP90B1P14625 803 aaKnown RBP13.57□□□□□ -0.24
SCN9A-205ENST00000454569 CHRNA5P30532 468 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 TAF7LQ5H9L4 462 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 KIF1BPQ96EK5 621 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
SCN9A-205ENST00000454569 TAF5LO75529 589 aa13.56□□□□□ -0.24
SCN9A-205ENST00000454569 RPS8P62241 208 aaKnown RBP13.56□□□□□ -0.24
SCN9A-205ENST00000454569 PLEKHM2Q8IWE5 1019 aa13.56□□□□□ -0.24
SCN9A-205ENST00000454569 VGLL2Q8N8G2 317 aa13.56□□□□□ -0.24
SCN9A-205ENST00000454569 FAM212AQ96EL1 285 aa13.56□□□□□ -0.24
SCN9A-205ENST00000454569 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
SCN9A-205ENST00000454569 CNNM1Q9NRU3 951 aa13.56□□□□□ -0.24
SCN9A-205ENST00000454569 C10orf71Q711Q0 1435 aa13.55□□□□□ -0.24
SCN9A-205ENST00000454569 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
SCN9A-205ENST00000454569 IL15P40933 162 aaPredicted RBP13.55□□□□□ -0.24
SCN9A-205ENST00000454569 TIMM10P62072 90 aa13.55□□□□□ -0.24
SCN9A-205ENST00000454569 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
SCN9A-205ENST00000454569 DDX46Q7L014 1031 aaKnown RBP13.55□□□□□ -0.24
SCN9A-205ENST00000454569 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
SCN9A-205ENST00000454569 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
SCN9A-205ENST00000454569 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 HOXA10P31260 410 aaPredicted RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 GRAPQ13588 217 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 TNNI3KQ59H18 835 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 OLFM4Q6UX06 510 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 C2CD5Q86YS7 1000 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 GRAPLQ8TC17 118 aaPredicted RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 MPHOSPH8Q99549 860 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 FPGT-TNNI3KV9GXZ4 949 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 SRCAPQ6ZRS2 3230 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 MYO5AQ9Y4I1 1855 aaKnown RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 PDE6BP35913 854 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 CHRNDQ07001 517 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 METTL24Q5JXM2 366 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 AACSQ86V21 672 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 ERC1Q8IUD2 1116 aa13.54□□□□□ -0.24
SCN9A-205ENST00000454569 BSDC1Q9NW68 430 aaPredicted RBP13.54□□□□□ -0.24
SCN9A-205ENST00000454569 LRRC37AA6NMS7 1700 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 ARAP2Q8WZ64 1704 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 AKAP11Q9UKA4 1901 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 KCNA3P22001 575 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 ADORA1P30542 326 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 RBM17Q96I25 401 aaKnown RBP13.53□□□□□ -0.24
SCN9A-205ENST00000454569 CRAMP1Q96RY5 1269 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 DBNDD2Q9BQY9 259 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
SCN9A-205ENST00000454569 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
SCN9A-205ENST00000454569 ZNF609O15014 1411 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms