RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 ZKSCAN5Q9Y2L8 839 aa15.95■□□□□ 0.14
LINC00343-203ENST00000454555 WDR33Q9C0J8 1336 aaKnown RBP15.95■□□□□ 0.14
LINC00343-203ENST00000454555 ANKRD36CQ5JPF3 1778 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 CASZ1Q86V15 1759 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 APBB1O00213 710 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 SUSD4Q5VX71 490 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 BICDL1Q6ZP65 573 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 PPP1R42Q7Z4L9 355 aa15.94■□□□□ 0.14
LINC00343-203ENST00000454555 CARMIL3Q8ND23 1372 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 LETM1O95202 739 aaPredicted RBP15.93■□□□□ 0.14
LINC00343-203ENST00000454555 UVSSAQ2YD98 709 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 USP44Q9H0E7 712 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 TMEM63CQ9P1W3 806 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 UTYO14607 1347 aa15.93■□□□□ 0.14
LINC00343-203ENST00000454555 H7C1W4 665 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 POLRMTO00411 1230 aaKnown RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 TMEM87AQ8NBN3 555 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 UTP14AQ9BVJ6 771 aaKnown RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 GRM8O00222 908 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 NTSR2O95665 410 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 PDIA4P13667 645 aaKnown RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 DDR1Q08345 913 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 TPTE2Q6XPS3 522 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 ZBTB38Q8NAP3 1195 aaPredicted RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 SSH3Q8TE77 659 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 C9orf78Q9NZ63 289 aaPredicted RBP15.92■□□□□ 0.14
LINC00343-203ENST00000454555 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
LINC00343-203ENST00000454555 SERPINB2P05120 415 aa15.91■□□□□ 0.14
LINC00343-203ENST00000454555 MMP10P09238 476 aa15.91■□□□□ 0.14
LINC00343-203ENST00000454555 HSPA4P34932 840 aa15.91■□□□□ 0.14
LINC00343-203ENST00000454555 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
LINC00343-203ENST00000454555 MTERF4Q7Z6M4 381 aaKnown RBP15.91■□□□□ 0.14
LINC00343-203ENST00000454555 TSPY26PQ9H489 355 aa15.91■□□□□ 0.14
LINC00343-203ENST00000454555 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
LINC00343-203ENST00000454555 TRIM6-TRIM34B2RNG4 842 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 CASP7P55210 303 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 NBPF5PQ86XG9 351 aaPredicted RBP15.9■□□□□ 0.14
LINC00343-203ENST00000454555 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 COL24A1Q17RW2 1714 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 SH3TC1Q8TE82 1336 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 SYCE3A1L190 88 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 NBPF7P0C2Y1 421 aaPredicted RBP15.9■□□□□ 0.14
LINC00343-203ENST00000454555 UBTFL1P0CB47 393 aaPredicted RBP15.9■□□□□ 0.14
LINC00343-203ENST00000454555 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
LINC00343-203ENST00000454555 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
LINC00343-203ENST00000454555 RILPL2Q969X0 211 aa15.89■□□□□ 0.13
LINC00343-203ENST00000454555 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
LINC00343-203ENST00000454555 RAD50Q92878 1312 aa15.88■□□□□ 0.13
LINC00343-203ENST00000454555 AFDNP55196 1824 aaKnown RBP15.88■□□□□ 0.13
LINC00343-203ENST00000454555 PNMA6EA0A0J9YXQ4 647 aa15.88■□□□□ 0.13
LINC00343-203ENST00000454555 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
LINC00343-203ENST00000454555 POLA2Q14181 598 aa15.88■□□□□ 0.13
LINC00343-203ENST00000454555 UBE3BQ7Z3V4 1068 aa15.88■□□□□ 0.13
LINC00343-203ENST00000454555 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
LINC00343-203ENST00000454555 GTF2E1P29083 439 aaPredicted RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 PRR5LQ6MZQ0 368 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 PLA2G12BQ9BX93 195 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 POLD1P28340 1107 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 ERFEQ4G0M1 354 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 CNTROBQ8N137 903 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 SGIP1Q9BQI5 828 aa15.87■□□□□ 0.13
LINC00343-203ENST00000454555 LRRFIP2Q9Y608 721 aaKnown RBP15.87■□□□□ 0.13
LINC00343-203ENST00000454555 IRS4O14654 1257 aaPredicted RBP15.86■□□□□ 0.13
LINC00343-203ENST00000454555 SYNE4Q8N205 404 aa15.86■□□□□ 0.13
LINC00343-203ENST00000454555 PALD1Q9ULE6 856 aa15.86■□□□□ 0.13
LINC00343-203ENST00000454555 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
LINC00343-203ENST00000454555 TTC41PQ6P2S7 1318 aa15.86■□□□□ 0.13
LINC00343-203ENST00000454555 SGSM2O43147 1006 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 ST5P78524 1137 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.85■□□□□ 0.13
LINC00343-203ENST00000454555 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 NPHP1O15259 732 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 PDE8AO60658 829 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 PTGER2P43116 358 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 RUFY2Q8WXA3 655 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 KAZALD1Q96I82 304 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
LINC00343-203ENST00000454555 ABCC12Q96J65 1359 aa15.84■□□□□ 0.13
LINC00343-203ENST00000454555 RPAP1Q9BWH6 1393 aaPredicted RBP15.84■□□□□ 0.13
LINC00343-203ENST00000454555 DYNC1I1O14576 645 aa15.84■□□□□ 0.13
LINC00343-203ENST00000454555 FOXO4P98177 505 aa15.83■□□□□ 0.12
LINC00343-203ENST00000454555 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms