RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 FAM161AQ3B820 660 aa18.03■□□□□ 0.48
RFTN1-207ENST00000453536 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
RFTN1-207ENST00000453536 SUPT20HQ8NEM7 779 aa18.03■□□□□ 0.48
RFTN1-207ENST00000453536 ECE2O60344 883 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 KLRK1P26718 216 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 WASHC4Q2M389 1173 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 CCDC152Q4G0S7 254 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 GRIPAP1Q4V328 841 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 CIAPIN1Q6FI81 312 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 CNTROBQ8N137 903 aa18.02■□□□□ 0.48
RFTN1-207ENST00000453536 SNAP23O00161 211 aa18.01■□□□□ 0.47
RFTN1-207ENST00000453536 LMOD1P29536 600 aaPredicted RBP18.01■□□□□ 0.47
RFTN1-207ENST00000453536 NEXNQ0ZGT2 675 aa18.01■□□□□ 0.47
RFTN1-207ENST00000453536 JMYQ8N9B5 988 aa18.01■□□□□ 0.47
RFTN1-207ENST00000453536 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
RFTN1-207ENST00000453536 BEND3Q5T5X7 828 aa18■□□□□ 0.47
RFTN1-207ENST00000453536 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
RFTN1-207ENST00000453536 ASTN2O75129 1339 aaPredicted RBP17.99■□□□□ 0.47
RFTN1-207ENST00000453536 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 GLIS2Q9BZE0 524 aaPredicted RBP17.99■□□□□ 0.47
RFTN1-207ENST00000453536 MYH16Q9H6N6 1097 aa17.99■□□□□ 0.47
RFTN1-207ENST00000453536 PNMA8AQ86V59 439 aaPredicted RBP17.98■□□□□ 0.47
RFTN1-207ENST00000453536 MICALL2Q8IY33 904 aa17.98■□□□□ 0.47
RFTN1-207ENST00000453536 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
RFTN1-207ENST00000453536 CREBZFQ9NS37 354 aa17.98■□□□□ 0.47
RFTN1-207ENST00000453536 PODXL2Q9NZ53 605 aa17.98■□□□□ 0.47
RFTN1-207ENST00000453536 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
RFTN1-207ENST00000453536 ITGA6P23229 1130 aa17.97■□□□□ 0.47
RFTN1-207ENST00000453536 FOXO4P98177 505 aa17.97■□□□□ 0.47
RFTN1-207ENST00000453536 TBC1D10BQ4KMP7 808 aaPredicted RBP17.97■□□□□ 0.47
RFTN1-207ENST00000453536 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
RFTN1-207ENST00000453536 VPS33BQ9H267 617 aa17.97■□□□□ 0.47
RFTN1-207ENST00000453536 CNOT7Q9UIV1 285 aaKnown RBP17.97■□□□□ 0.47
RFTN1-207ENST00000453536 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
RFTN1-207ENST00000453536 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
RFTN1-207ENST00000453536 RBM26Q5T8P6 1007 aaKnown RBP17.96■□□□□ 0.47
RFTN1-207ENST00000453536 MRPL50Q8N5N7 158 aaKnown RBP17.96■□□□□ 0.47
RFTN1-207ENST00000453536 ZNF594Q96JF6 807 aaPredicted RBP17.96■□□□□ 0.47
RFTN1-207ENST00000453536 ADARB2Q9NS39 739 aaKnown RBP17.96■□□□□ 0.47
RFTN1-207ENST00000453536 SCAF8Q9UPN6 1271 aaKnown RBP17.96■□□□□ 0.47
RFTN1-207ENST00000453536 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
RFTN1-207ENST00000453536 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
RFTN1-207ENST00000453536 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
RFTN1-207ENST00000453536 VEGFBP49765 207 aa17.95■□□□□ 0.46
RFTN1-207ENST00000453536 CST9Q5W186 159 aa17.95■□□□□ 0.46
RFTN1-207ENST00000453536 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
RFTN1-207ENST00000453536 XDHP47989 1333 aa17.95■□□□□ 0.46
RFTN1-207ENST00000453536 CSF1RP07333 972 aa17.94■□□□□ 0.46
RFTN1-207ENST00000453536 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
RFTN1-207ENST00000453536 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
RFTN1-207ENST00000453536 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
RFTN1-207ENST00000453536 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
RFTN1-207ENST00000453536 KAZALD1Q96I82 304 aa17.94■□□□□ 0.46
RFTN1-207ENST00000453536 PLA2G12BQ9BX93 195 aa17.94■□□□□ 0.46
RFTN1-207ENST00000453536 TNIP1Q15025 636 aa17.93■□□□□ 0.46
RFTN1-207ENST00000453536 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
RFTN1-207ENST00000453536 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
RFTN1-207ENST00000453536 EYA3Q99504 573 aa17.93■□□□□ 0.46
RFTN1-207ENST00000453536 ZC3H12CQ9C0D7 883 aaKnown RBP17.93■□□□□ 0.46
RFTN1-207ENST00000453536 BSDC1Q9NW68 430 aaPredicted RBP17.93■□□□□ 0.46
RFTN1-207ENST00000453536 CHMP3Q9Y3E7 222 aa17.93■□□□□ 0.46
RFTN1-207ENST00000453536 TAF5LO75529 589 aa17.92■□□□□ 0.46
RFTN1-207ENST00000453536 NBPF7P0C2Y1 421 aaPredicted RBP17.92■□□□□ 0.46
RFTN1-207ENST00000453536 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
RFTN1-207ENST00000453536 CHMP4AQ9BY43 222 aa17.92■□□□□ 0.46
RFTN1-207ENST00000453536 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
RFTN1-207ENST00000453536 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
RFTN1-207ENST00000453536 GRM1Q13255 1194 aa17.91■□□□□ 0.46
RFTN1-207ENST00000453536 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
RFTN1-207ENST00000453536 ABT1Q9ULW3 272 aaKnown RBP17.91■□□□□ 0.46
RFTN1-207ENST00000453536 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 GRM8O00222 908 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 ATP2B4P23634 1241 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 CHRNDQ07001 517 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 FBXW7Q969H0 707 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 MED23Q9ULK4 1368 aa17.9■□□□□ 0.46
RFTN1-207ENST00000453536 VIL1P09327 827 aaKnown RBP17.89■□□□□ 0.45
RFTN1-207ENST00000453536 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
RFTN1-207ENST00000453536 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
RFTN1-207ENST00000453536 CYP4F22Q6NT55 531 aa17.89■□□□□ 0.45
RFTN1-207ENST00000453536 MIER1Q8N108 512 aa17.89■□□□□ 0.45
RFTN1-207ENST00000453536 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.45
RFTN1-207ENST00000453536 JAG2Q9Y219 1238 aa17.89■□□□□ 0.45
RFTN1-207ENST00000453536 E9PSI1 815 aa17.88■□□□□ 0.45
RFTN1-207ENST00000453536 G3V3G9 751 aa17.88■□□□□ 0.45
RFTN1-207ENST00000453536 CELF2O95319 508 aaKnown RBP17.88■□□□□ 0.45
RFTN1-207ENST00000453536 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
RFTN1-207ENST00000453536 GMLQ99445 158 aa17.88■□□□□ 0.45
RFTN1-207ENST00000453536 PGAP2Q9UHJ9 254 aa17.88■□□□□ 0.45
RFTN1-207ENST00000453536 RASSF10A6NK89 507 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 H7C1D1 291 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 FOXN1O15353 648 aa17.87■□□□□ 0.45
RFTN1-207ENST00000453536 KIF4BQ2VIQ3 1234 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms