RNA–Protein interactions for RNA: ENST00000453135.1

LINC01647-201, Transcript of long intergenic non-protein coding RNA 1647, humanhuman

TSL 1 (best) BASIC

Gene LINC01647, Length 1,285 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01647-201ENST00000453135 CCDC85AQ96PX6 553 aaPredicted RBP10.94□□□□□ -0.66
LINC01647-201ENST00000453135 CRAMP1Q96RY5 1269 aa10.94□□□□□ -0.66
LINC01647-201ENST00000453135 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
LINC01647-201ENST00000453135 CSF1RP07333 972 aa10.93□□□□□ -0.66
LINC01647-201ENST00000453135 GNAI3P08754 354 aa10.93□□□□□ -0.66
LINC01647-201ENST00000453135 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
LINC01647-201ENST00000453135 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
LINC01647-201ENST00000453135 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
LINC01647-201ENST00000453135 PAXIP1Q6ZW49 1069 aaPredicted RBP10.93□□□□□ -0.66
LINC01647-201ENST00000453135 MEIS3Q99687 375 aa10.93□□□□□ -0.66
LINC01647-201ENST00000453135 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
LINC01647-201ENST00000453135 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
LINC01647-201ENST00000453135 N4BP2Q86UW6 1770 aaPredicted RBP10.93□□□□□ -0.66
LINC01647-201ENST00000453135 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
LINC01647-201ENST00000453135 FOXO4P98177 505 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 GRAPQ13588 217 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 EPHA10Q5JZY3 1008 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 PRPF40BQ6NWY9 871 aaKnown RBP10.92□□□□□ -0.66
LINC01647-201ENST00000453135 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 GRAPLQ8TC17 118 aaPredicted RBP10.92□□□□□ -0.66
LINC01647-201ENST00000453135 CHMP3Q9Y3E7 222 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 KIAA1551Q9HCM1 1747 aa10.92□□□□□ -0.66
LINC01647-201ENST00000453135 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
LINC01647-201ENST00000453135 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
LINC01647-201ENST00000453135 GRIN3BO60391 1043 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 BBOX1O75936 387 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC01647-201ENST00000453135 MVPQ14764 893 aaKnown RBP10.91□□□□□ -0.66
LINC01647-201ENST00000453135 C20orf194Q5TEA3 1177 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 BICC1Q9H694 974 aaKnown RBP10.91□□□□□ -0.66
LINC01647-201ENST00000453135 GREM2Q9H772 168 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 SEC31BQ9NQW1 1179 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 COG6Q9Y2V7 657 aa10.91□□□□□ -0.66
LINC01647-201ENST00000453135 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 ANKRD18BA2A2Z9 1011 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 C21orf2O43822 256 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 GNAI2P04899 355 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 ITGA6P23229 1130 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 RPS8P62241 208 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 IFIT5Q13325 482 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 FAM161AQ3B820 660 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 RABL6Q3YEC7 729 aaPredicted RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 SOGA3Q5TF21 947 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 TMC4Q7Z404 712 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 ANKRD44Q8N8A2 993 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 CELF1Q92879 486 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 CDC5LQ99459 802 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 TMX4Q9H1E5 349 aaPredicted RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 CHMP4BQ9H444 224 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 DDX19BQ9UMR2 479 aa10.9□□□□□ -0.66
LINC01647-201ENST00000453135 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
LINC01647-201ENST00000453135 RTL9Q8NET4 1388 aa10.9□□□□□ -0.67
LINC01647-201ENST00000453135 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
LINC01647-201ENST00000453135 IGHMBP2P38935 993 aaKnown RBP10.89□□□□□ -0.67
LINC01647-201ENST00000453135 CCDC57Q2TAC2 916 aa10.89□□□□□ -0.67
LINC01647-201ENST00000453135 CC2D2BQ6DHV5 1058 aa10.89□□□□□ -0.67
LINC01647-201ENST00000453135 C7orf43Q8WVR3 580 aa10.89□□□□□ -0.67
LINC01647-201ENST00000453135 LAMB2P55268 1798 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 CCDC93Q567U6 631 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 TAF7LQ5H9L4 462 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 ARHGAP27Q6ZUM4 889 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 SP8Q8IXZ3 490 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 ATP6V0A2Q9Y487 856 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 DLEC1Q9Y238 1755 aa10.88□□□□□ -0.67
LINC01647-201ENST00000453135 UTRNP46939 3433 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 SLX4Q8IY92 1834 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 GRIPAP1Q4V328 841 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 OLFM4Q6UX06 510 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 RTKN2Q8IZC4 609 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
LINC01647-201ENST00000453135 BSDC1Q9NW68 430 aaPredicted RBP10.87□□□□□ -0.67
LINC01647-201ENST00000453135 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
LINC01647-201ENST00000453135 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
LINC01647-201ENST00000453135 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
LINC01647-201ENST00000453135 MS4A4AQ96JQ5 239 aa10.86□□□□□ -0.67
LINC01647-201ENST00000453135 C1orf115Q9H7X2 142 aa10.86□□□□□ -0.67
LINC01647-201ENST00000453135 ZBTB40Q9NUA8 1239 aa10.86□□□□□ -0.67
LINC01647-201ENST00000453135 MYH3P11055 1940 aa10.86□□□□□ -0.67
LINC01647-201ENST00000453135 SRGAP3O43295 1099 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
LINC01647-201ENST00000453135 MTX1Q13505 466 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 LDHAL6AQ6ZMR3 332 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 MPNDQ8N594 471 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 CRBNQ96SW2 442 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 CNNM1Q9NRU3 951 aa10.85□□□□□ -0.67
LINC01647-201ENST00000453135 NFKBIEO00221 500 aa10.84□□□□□ -0.67
LINC01647-201ENST00000453135 RFX5P48382 616 aaPredicted RBP10.84□□□□□ -0.67
LINC01647-201ENST00000453135 FKBP4Q02790 459 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC01647-201ENST00000453135 DPP8Q6V1X1 898 aaPredicted RBP10.84□□□□□ -0.67
LINC01647-201ENST00000453135 SLC51AQ86UW1 340 aa10.84□□□□□ -0.67
LINC01647-201ENST00000453135 KLHDC4Q8TBB5 520 aa10.84□□□□□ -0.67
LINC01647-201ENST00000453135 PSMD1Q99460 953 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms