RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 MICALL2Q8IY33 904 aa14.1□□□□□ -0.15
USP1-204ENST00000452143 ZBTB38Q8NAP3 1195 aaPredicted RBP14.1□□□□□ -0.15
USP1-204ENST00000452143 TRPM4Q8TD43 1214 aa14.1□□□□□ -0.15
USP1-204ENST00000452143 GLIS2Q9BZE0 524 aaPredicted RBP14.1□□□□□ -0.15
USP1-204ENST00000452143 ZNF609O15014 1411 aa14.09□□□□□ -0.15
USP1-204ENST00000452143 CA12O43570 354 aa14.09□□□□□ -0.15
USP1-204ENST00000452143 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
USP1-204ENST00000452143 PODXL2Q9NZ53 605 aa14.09□□□□□ -0.15
USP1-204ENST00000452143 C6orf229H3BNL8 230 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 PSMD14O00487 310 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 RPS8P62241 208 aaKnown RBP14.08□□□□□ -0.16
USP1-204ENST00000452143 GPSM2P81274 684 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 GRM1Q13255 1194 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 RTL5Q5HYW3 569 aaPredicted RBP14.08□□□□□ -0.16
USP1-204ENST00000452143 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 ZNF428Q96B54 188 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 DBNDD1Q9H9R9 158 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
USP1-204ENST00000452143 POLR2AP24928 1970 aaKnown RBP14.08□□□□□ -0.16
USP1-204ENST00000452143 APAF1O14727 1248 aa14.07□□□□□ -0.16
USP1-204ENST00000452143 ECE2O60344 883 aa14.07□□□□□ -0.16
USP1-204ENST00000452143 PCCAP05165 728 aaPredicted RBP14.07□□□□□ -0.16
USP1-204ENST00000452143 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
USP1-204ENST00000452143 CCDC152Q4G0S7 254 aa14.07□□□□□ -0.16
USP1-204ENST00000452143 TBC1D16Q8TBP0 767 aa14.07□□□□□ -0.16
USP1-204ENST00000452143 PHAXQ9H814 394 aaKnown RBP14.07□□□□□ -0.16
USP1-204ENST00000452143 ZBTB12Q9Y330 459 aaPredicted RBP14.07□□□□□ -0.16
USP1-204ENST00000452143 RTL9Q8NET4 1388 aa14.07□□□□□ -0.16
USP1-204ENST00000452143 SPEF2Q9C093 1822 aa14.06□□□□□ -0.16
USP1-204ENST00000452143 SHTN1A0MZ66 631 aa14.06□□□□□ -0.16
USP1-204ENST00000452143 DDX58O95786 925 aaKnown RBP14.06□□□□□ -0.16
USP1-204ENST00000452143 MYD88Q99836 296 aa14.06□□□□□ -0.16
USP1-204ENST00000452143 ZNF408Q9H9D4 720 aa14.06□□□□□ -0.16
USP1-204ENST00000452143 CWC25Q9NXE8 425 aaPredicted RBP14.06□□□□□ -0.16
USP1-204ENST00000452143 RIMBP2O15034 1052 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 PDE8AO60658 829 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 AOC2O75106 756 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 NOGQ13253 232 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
USP1-204ENST00000452143 METTL22Q9BUU2 404 aaPredicted RBP14.05□□□□□ -0.16
USP1-204ENST00000452143 ZC3H12CQ9C0D7 883 aaKnown RBP14.05□□□□□ -0.16
USP1-204ENST00000452143 CACNA1FO60840 1977 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 HAX1O00165 279 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 UFL1O94874 794 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 TBC1D10BQ4KMP7 808 aaPredicted RBP14.04□□□□□ -0.16
USP1-204ENST00000452143 SAMD7Q7Z3H4 446 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 KRT26Q7Z3Y9 468 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
USP1-204ENST00000452143 SEC31BQ9NQW1 1179 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 ANKIB1Q9P2G1 1089 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 GGA1Q9UJY5 639 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 XDHP47989 1333 aa14.04□□□□□ -0.16
USP1-204ENST00000452143 ELL2O00472 640 aaPredicted RBP14.03□□□□□ -0.16
USP1-204ENST00000452143 EGFRP00533 1210 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 VIL1P09327 827 aaKnown RBP14.03□□□□□ -0.16
USP1-204ENST00000452143 HUNKP57058 714 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 DOK7Q18PE1 504 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 C8orf58Q8NAV2 365 aa14.03□□□□□ -0.16
USP1-204ENST00000452143 DCPSQ96C86 337 aaKnown RBP14.03□□□□□ -0.16
USP1-204ENST00000452143 ZNF646O15015 1829 aaPredicted RBP14.03□□□□□ -0.16
USP1-204ENST00000452143 CASP8AP2Q9UKL3 1982 aa14.02□□□□□ -0.16
USP1-204ENST00000452143 G3V3G9 751 aa14.02□□□□□ -0.17
USP1-204ENST00000452143 DCAF8Q5TAQ9 597 aa14.02□□□□□ -0.17
USP1-204ENST00000452143 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.17
USP1-204ENST00000452143 AGBL3Q8NEM8 1001 aa14.02□□□□□ -0.17
USP1-204ENST00000452143 CDC5LQ99459 802 aaKnown RBP14.02□□□□□ -0.17
USP1-204ENST00000452143 AKAP11Q9UKA4 1901 aa14.02□□□□□ -0.17
USP1-204ENST00000452143 CTSWP56202 376 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 ZNF280AP59817 542 aaPredicted RBP14.01□□□□□ -0.17
USP1-204ENST00000452143 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 GBA2Q9HCG7 927 aaPredicted RBP14.01□□□□□ -0.17
USP1-204ENST00000452143 KCNQ5Q9NR82 932 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 GGA3Q9NZ52 723 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 MAP3K2Q9Y2U5 619 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 PAPPA2Q9BXP8 1791 aa14.01□□□□□ -0.17
USP1-204ENST00000452143 MED23Q9ULK4 1368 aa14□□□□□ -0.17
USP1-204ENST00000452143 ADM5C9JUS6 153 aa14□□□□□ -0.17
USP1-204ENST00000452143 NEXNQ0ZGT2 675 aa14□□□□□ -0.17
USP1-204ENST00000452143 RGMBQ6NW40 437 aa14□□□□□ -0.17
USP1-204ENST00000452143 RSBN1LQ6PCB5 846 aaPredicted RBP14□□□□□ -0.17
USP1-204ENST00000452143 C2orf69Q8N8R5 385 aa14□□□□□ -0.17
USP1-204ENST00000452143 STK31Q9BXU1 1019 aa14□□□□□ -0.17
USP1-204ENST00000452143 TSKSQ9UJT2 592 aa14□□□□□ -0.17
USP1-204ENST00000452143 PITPNM2Q9BZ72 1349 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 ATP2B4P23634 1241 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 RBM26Q5T8P6 1007 aaKnown RBP13.99□□□□□ -0.17
USP1-204ENST00000452143 PODNQ7Z5L7 613 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 SAGE1Q9NXZ1 904 aa13.99□□□□□ -0.17
USP1-204ENST00000452143 FAM155AB1AL88 458 aaPredicted RBP13.98□□□□□ -0.17
USP1-204ENST00000452143 IGKV5-2P06315 115 aa13.98□□□□□ -0.17
USP1-204ENST00000452143 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
USP1-204ENST00000452143 CCDC85AQ96PX6 553 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms