RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 EIF6P56537 245 aaKnown RBP20.39■□□□□ 0.85
SCAMP4-205ENST00000452128 FSTL1Q12841 308 aa20.39■□□□□ 0.85
SCAMP4-205ENST00000452128 GPR101Q96P66 508 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-205ENST00000452128 XDHP47989 1333 aa20.38■□□□□ 0.85
SCAMP4-205ENST00000452128 SCNN1DP51172 638 aa20.38■□□□□ 0.85
SCAMP4-205ENST00000452128 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
SCAMP4-205ENST00000452128 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
SCAMP4-205ENST00000452128 MYH3P11055 1940 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 C6orf229H3BNL8 230 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 BCAR3O75815 825 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 KCNQ5Q9NR82 932 aa20.37■□□□□ 0.85
SCAMP4-205ENST00000452128 HSPA6P17066 643 aa20.36■□□□□ 0.85
SCAMP4-205ENST00000452128 ATP2B4P23634 1241 aa20.36■□□□□ 0.85
SCAMP4-205ENST00000452128 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
SCAMP4-205ENST00000452128 ANKIB1Q9P2G1 1089 aa20.36■□□□□ 0.85
SCAMP4-205ENST00000452128 IRS2Q9Y4H2 1338 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 ANKRD18BA2A2Z9 1011 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 RIMBP2O15034 1052 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 UFL1O94874 794 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 IGHMBP2P38935 993 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 IFIT5Q13325 482 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 EYA3Q99504 573 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 HACL1Q9UJ83 578 aa20.35■□□□□ 0.85
SCAMP4-205ENST00000452128 EPS15P42566 896 aa20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 CCT4P50991 539 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 SMC1BQ8NDV3 1235 aa20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 ZC3H12CQ9C0D7 883 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 GJA3Q9Y6H8 435 aa20.34■□□□□ 0.85
SCAMP4-205ENST00000452128 RAD17O75943 681 aa20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 EPHX2P34913 555 aa20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 TXNRD3Q86VQ6 643 aa20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 ZNF594Q96JF6 807 aaPredicted RBP20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
SCAMP4-205ENST00000452128 SCN4AP35499 1836 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 ECE2O60344 883 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 TRIM27P14373 513 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 CHRNDQ07001 517 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 GPRC5DQ9NZD1 345 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 TNNQ9UQP3 1299 aa20.32■□□□□ 0.84
SCAMP4-205ENST00000452128 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 PSMD14O00487 310 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 VIL1P09327 827 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 TNIP1Q15025 636 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 C15orf52Q6ZUT6 534 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 MPHOSPH8Q99549 860 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 ANKRD2Q9GZV1 360 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 RIPOR2Q9Y4F9 1068 aa20.31■□□□□ 0.84
SCAMP4-205ENST00000452128 SNAP23O00161 211 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 RFX5P48382 616 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 CCDC57Q2TAC2 916 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 CHADLQ6NUI6 762 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 ATF7IPQ6VMQ6 1270 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 LDHDQ86WU2 507 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 DPF2Q92785 391 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 MED23Q9ULK4 1368 aa20.3■□□□□ 0.84
SCAMP4-205ENST00000452128 ADAMTSL1Q8N6G6 1762 aa20.29■□□□□ 0.84
SCAMP4-205ENST00000452128 ITGBL1O95965 494 aaPredicted RBP20.29■□□□□ 0.84
SCAMP4-205ENST00000452128 KLRK1P26718 216 aa20.29■□□□□ 0.84
SCAMP4-205ENST00000452128 GMLQ99445 158 aa20.29■□□□□ 0.84
SCAMP4-205ENST00000452128 PUS3Q9BZE2 481 aaKnown RBP20.29■□□□□ 0.84
SCAMP4-205ENST00000452128 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 LDHAL6AQ6ZMR3 332 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 PODNQ7Z5L7 613 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 PNMA8AQ86V59 439 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 HELBQ8NG08 1087 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 CHMP3Q9Y3E7 222 aa20.28■□□□□ 0.84
SCAMP4-205ENST00000452128 ZNF609O15014 1411 aa20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 SCN9AQ15858 1988 aa20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 SHTN1A0MZ66 631 aa20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 TAF5LO75529 589 aa20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 HIRAP54198 1017 aaPredicted RBP20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 MEIS3Q99687 375 aa20.27■□□□□ 0.84
SCAMP4-205ENST00000452128 PASKQ96RG2 1323 aa20.27■□□□□ 0.83
SCAMP4-205ENST00000452128 APLP1P51693 650 aa20.26■□□□□ 0.83
SCAMP4-205ENST00000452128 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
SCAMP4-205ENST00000452128 RPS12P25398 132 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-205ENST00000452128 VGLL2Q8N8G2 317 aa20.25■□□□□ 0.83
SCAMP4-205ENST00000452128 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
SCAMP4-205ENST00000452128 ADARB2Q9NS39 739 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-205ENST00000452128 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
SCAMP4-205ENST00000452128 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
SCAMP4-205ENST00000452128 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-205ENST00000452128 LRRC24Q50LG9 513 aa20.24■□□□□ 0.83
SCAMP4-205ENST00000452128 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
SCAMP4-205ENST00000452128 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
SCAMP4-205ENST00000452128 KLHDC4Q8TBB5 520 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms