RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 DIEXFQ68CQ4 756 aaKnown RBP22.78■■□□□ 1.24
CTNS-204ENST00000452111 MRPL50Q8N5N7 158 aaKnown RBP22.78■■□□□ 1.24
CTNS-204ENST00000452111 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
CTNS-204ENST00000452111 ITGA6P23229 1130 aa22.77■■□□□ 1.24
CTNS-204ENST00000452111 TNIP1Q15025 636 aa22.77■■□□□ 1.24
CTNS-204ENST00000452111 BCL2L13Q9BXK5 485 aa22.77■■□□□ 1.24
CTNS-204ENST00000452111 GPRC5DQ9NZD1 345 aa22.77■■□□□ 1.24
CTNS-204ENST00000452111 XDHP47989 1333 aa22.77■■□□□ 1.24
CTNS-204ENST00000452111 ECE2O60344 883 aa22.76■■□□□ 1.23
CTNS-204ENST00000452111 MAP1SQ66K74 1059 aaPredicted RBP22.76■■□□□ 1.23
CTNS-204ENST00000452111 SSH1Q8WYL5 1049 aa22.76■■□□□ 1.23
CTNS-204ENST00000452111 ZC3H12CQ9C0D7 883 aaKnown RBP22.76■■□□□ 1.23
CTNS-204ENST00000452111 BSDC1Q9NW68 430 aaPredicted RBP22.76■■□□□ 1.23
CTNS-204ENST00000452111 GRM8O00222 908 aa22.75■■□□□ 1.23
CTNS-204ENST00000452111 CSF1RP07333 972 aa22.75■■□□□ 1.23
CTNS-204ENST00000452111 IGHMBP2P38935 993 aaKnown RBP22.75■■□□□ 1.23
CTNS-204ENST00000452111 MIER1Q8N108 512 aa22.75■■□□□ 1.23
CTNS-204ENST00000452111 SRCIN1Q9C0H9 1055 aa22.75■■□□□ 1.23
CTNS-204ENST00000452111 MINPP1Q9UNW1 487 aa22.75■■□□□ 1.23
CTNS-204ENST00000452111 KLRG1Q96E93 195 aa22.74■■□□□ 1.23
CTNS-204ENST00000452111 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
CTNS-204ENST00000452111 G3V3G9 751 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 PSMD14O00487 310 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 ALDH1L1O75891 902 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 ATP2B4P23634 1241 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 FOXO4P98177 505 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 DCAF8Q5TAQ9 597 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 USP50Q70EL3 339 aaPredicted RBP22.73■■□□□ 1.23
CTNS-204ENST00000452111 TRMT2AQ8IZ69 625 aaKnown RBP22.73■■□□□ 1.23
CTNS-204ENST00000452111 CNTROBQ8N137 903 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 KCNQ5Q9NR82 932 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 ADARB2Q9NS39 739 aaKnown RBP22.73■■□□□ 1.23
CTNS-204ENST00000452111 ZBTB12Q9Y330 459 aaPredicted RBP22.73■■□□□ 1.23
CTNS-204ENST00000452111 CHMP3Q9Y3E7 222 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 PASKQ96RG2 1323 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 ADAMTSL1Q8N6G6 1762 aa22.73■■□□□ 1.23
CTNS-204ENST00000452111 MYH3P11055 1940 aa22.72■■□□□ 1.23
CTNS-204ENST00000452111 MPHOSPH8Q99549 860 aa22.72■■□□□ 1.23
CTNS-204ENST00000452111 PTPRCP08575 1304 aa22.72■■□□□ 1.23
CTNS-204ENST00000452111 ANKRD18BA2A2Z9 1011 aa22.71■■□□□ 1.23
CTNS-204ENST00000452111 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
CTNS-204ENST00000452111 ITGBL1O95965 494 aaPredicted RBP22.71■■□□□ 1.23
CTNS-204ENST00000452111 SMC4Q9NTJ3 1288 aa22.71■■□□□ 1.23
CTNS-204ENST00000452111 SHTN1A0MZ66 631 aa22.7■■□□□ 1.22
CTNS-204ENST00000452111 EPHA10Q5JZY3 1008 aa22.7■■□□□ 1.22
CTNS-204ENST00000452111 CREBZFQ9NS37 354 aa22.7■■□□□ 1.22
CTNS-204ENST00000452111 CCT4P50991 539 aaKnown RBP22.69■■□□□ 1.22
CTNS-204ENST00000452111 IFIT5Q13325 482 aaKnown RBP22.69■■□□□ 1.22
CTNS-204ENST00000452111 ALDH1L2Q3SY69 923 aa22.69■■□□□ 1.22
CTNS-204ENST00000452111 LMBR1LQ6UX01 489 aa22.69■■□□□ 1.22
CTNS-204ENST00000452111 MICALL2Q8IY33 904 aa22.69■■□□□ 1.22
CTNS-204ENST00000452111 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
CTNS-204ENST00000452111 TRPM4Q8TD43 1214 aa22.68■■□□□ 1.22
CTNS-204ENST00000452111 MED23Q9ULK4 1368 aa22.67■■□□□ 1.22
CTNS-204ENST00000452111 SPEF2Q9C093 1822 aa22.67■■□□□ 1.22
CTNS-204ENST00000452111 H7C1D1 291 aa22.67■■□□□ 1.22
CTNS-204ENST00000452111 SUCLG2Q96I99 432 aa22.67■■□□□ 1.22
CTNS-204ENST00000452111 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
CTNS-204ENST00000452111 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
CTNS-204ENST00000452111 CCDC57Q2TAC2 916 aa22.66■■□□□ 1.22
CTNS-204ENST00000452111 DPF2Q92785 391 aa22.66■■□□□ 1.22
CTNS-204ENST00000452111 ANKRD2Q9GZV1 360 aa22.66■■□□□ 1.22
CTNS-204ENST00000452111 TMEM88BA6NKF7 163 aa22.65■■□□□ 1.22
CTNS-204ENST00000452111 RPS12P25398 132 aaKnown RBP22.65■■□□□ 1.22
CTNS-204ENST00000452111 HIRAP54198 1017 aaPredicted RBP22.65■■□□□ 1.22
CTNS-204ENST00000452111 CHRNDQ07001 517 aa22.65■■□□□ 1.22
CTNS-204ENST00000452111 TAF7LQ5H9L4 462 aa22.65■■□□□ 1.22
CTNS-204ENST00000452111 MKRN1Q9UHC7 482 aaKnown RBP22.65■■□□□ 1.22
CTNS-204ENST00000452111 LEMD3Q9Y2U8 911 aa22.65■■□□□ 1.22
CTNS-204ENST00000452111 ZNF804BA4D1E1 1349 aa22.64■■□□□ 1.22
CTNS-204ENST00000452111 VIL1P09327 827 aaKnown RBP22.64■■□□□ 1.21
CTNS-204ENST00000452111 KCNJ4P48050 445 aa22.64■■□□□ 1.21
CTNS-204ENST00000452111 FMR1Q06787 632 aaKnown RBP eCLIP22.64■■□□□ 1.21
CTNS-204ENST00000452111 SAMD7Q7Z3H4 446 aa22.64■■□□□ 1.21
CTNS-204ENST00000452111 ZNF594Q96JF6 807 aaPredicted RBP22.64■■□□□ 1.21
CTNS-204ENST00000452111 UTYO14607 1347 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 TRAF5O00463 557 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 KLRK1P26718 216 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 TBC1D10BQ4KMP7 808 aaPredicted RBP22.63■■□□□ 1.21
CTNS-204ENST00000452111 PODNQ7Z5L7 613 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 JMYQ8N9B5 988 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 KAZALD1Q96I82 304 aa22.63■■□□□ 1.21
CTNS-204ENST00000452111 RSBN1LQ6PCB5 846 aaPredicted RBP22.62■■□□□ 1.21
CTNS-204ENST00000452111 TXNRD3Q86VQ6 643 aa22.62■■□□□ 1.21
CTNS-204ENST00000452111 HELBQ8NG08 1087 aaPredicted RBP22.62■■□□□ 1.21
CTNS-204ENST00000452111 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
CTNS-204ENST00000452111 SCN9AQ15858 1988 aa22.61■■□□□ 1.21
CTNS-204ENST00000452111 SNAP23O00161 211 aa22.61■■□□□ 1.21
CTNS-204ENST00000452111 TAF5LO75529 589 aa22.61■■□□□ 1.21
CTNS-204ENST00000452111 EGFRP00533 1210 aa22.61■■□□□ 1.21
CTNS-204ENST00000452111 HNRNPUQ00839 825 aaKnown RBP eCLIP22.61■■□□□ 1.21
CTNS-204ENST00000452111 RBM26Q5T8P6 1007 aaKnown RBP22.61■■□□□ 1.21
CTNS-204ENST00000452111 LDHAL6AQ6ZMR3 332 aa22.61■■□□□ 1.21
CTNS-204ENST00000452111 NOB1Q9ULX3 412 aaKnown RBP22.61■■□□□ 1.21
CTNS-204ENST00000452111 USP17L3A6NCW0 530 aa22.6■■□□□ 1.21
CTNS-204ENST00000452111 USP17L4A6NCW7 530 aa22.6■■□□□ 1.21
CTNS-204ENST00000452111 USP17L1Q7RTZ2 530 aa22.6■■□□□ 1.21
CTNS-204ENST00000452111 ZC3H15Q8WU90 426 aaKnown RBP22.6■■□□□ 1.21
CTNS-204ENST00000452111 FBXW7Q969H0 707 aa22.6■■□□□ 1.21
CTNS-204ENST00000452111 GLIS2Q9BZE0 524 aaPredicted RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms