RNA–Protein interactions for RNA: ENST00000451336.2

LINC00347-201, long intergenic non-protein coding RNA 347, humanhuman

TSL 2

Gene LINC00347, Length 679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-201ENST00000451336 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
LINC00347-201ENST00000451336 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.97
LINC00347-201ENST00000451336 CCNL1Q9UK58 526 aaPredicted RBP9.02□□□□□ -0.97
LINC00347-201ENST00000451336 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
LINC00347-201ENST00000451336 C5P01031 1676 aa9.01□□□□□ -0.97
LINC00347-201ENST00000451336 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
LINC00347-201ENST00000451336 SIK1P57059 783 aa9.01□□□□□ -0.97
LINC00347-201ENST00000451336 PLA2G2CQ5R387 149 aa9.01□□□□□ -0.97
LINC00347-201ENST00000451336 PRPF38BQ5VTL8 546 aaKnown RBP9.01□□□□□ -0.97
LINC00347-201ENST00000451336 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
LINC00347-201ENST00000451336 SIPA1L3O60292 1781 aaPredicted RBP9□□□□□ -0.97
LINC00347-201ENST00000451336 POLD1P28340 1107 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 RIPK4P57078 832 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 MTMR2Q13614 643 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 CCDC27Q2M243 656 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 ZNF790Q6PG37 636 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 LGR6Q9HBX8 967 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 PRDM10Q9NQV6 1147 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 ATG3Q9NT62 314 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 ASAP1Q9ULH1 1129 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 KCPQ6ZWJ8 1503 aa9□□□□□ -0.97
LINC00347-201ENST00000451336 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 C6orf229H3BNL8 230 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 SLC19A1P41440 591 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 BRPF1P55201 1214 aaPredicted RBP8.99□□□□□ -0.97
LINC00347-201ENST00000451336 FSTL1Q12841 308 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 TAF7Q15545 349 aaPredicted RBP8.99□□□□□ -0.97
LINC00347-201ENST00000451336 CCDC184Q52MB2 194 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 DESI1Q6ICB0 168 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 LIAT1Q6ZQX7 453 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
LINC00347-201ENST00000451336 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 FCF1Q9Y324 198 aaKnown RBP8.99□□□□□ -0.97
LINC00347-201ENST00000451336 CNTNAP4Q9C0A0 1308 aa8.99□□□□□ -0.97
LINC00347-201ENST00000451336 QSER1Q2KHR3 1735 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 BTBD11A6QL63 1104 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 JUNDP17535 347 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 SPRYD7Q5W111 196 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 MCM10Q7L590 875 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 NMRK2Q9NPI5 230 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 LRRC4BQ9NT99 713 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 HEG1Q9ULI3 1381 aa8.98□□□□□ -0.97
LINC00347-201ENST00000451336 C4BP0C0L5 1744 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 APAF1O14727 1248 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 FOXN1O15353 648 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 RPIAP49247 311 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 SKIV2LQ15477 1246 aaKnown RBP8.97□□□□□ -0.97
LINC00347-201ENST00000451336 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
LINC00347-201ENST00000451336 ZBTB3Q9H5J0 574 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 IL16Q14005 1332 aa8.97□□□□□ -0.97
LINC00347-201ENST00000451336 COL5A3P25940 1745 aaPredicted RBP8.97□□□□□ -0.97
LINC00347-201ENST00000451336 VIRMAQ69YN4 1812 aaKnown RBP8.96□□□□□ -0.97
LINC00347-201ENST00000451336 DLG5Q8TDM6 1919 aa8.96□□□□□ -0.97
LINC00347-201ENST00000451336 LILRB3O75022 631 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 PTCD1O75127 700 aaKnown RBP8.96□□□□□ -0.98
LINC00347-201ENST00000451336 STARD3NLO95772 234 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 SSFA2P28290 1259 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
LINC00347-201ENST00000451336 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 SLC16A10Q8TF71 515 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 CHMP4AQ9BY43 222 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 GOPCQ9HD26 462 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 SOS1Q07889 1333 aaPredicted RBP8.96□□□□□ -0.98
LINC00347-201ENST00000451336 KDM3BQ7LBC6 1761 aa8.96□□□□□ -0.98
LINC00347-201ENST00000451336 TJP1Q07157 1748 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 HOXB7P09629 217 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 SNRPA1P09661 255 aaKnown RBP8.95□□□□□ -0.98
LINC00347-201ENST00000451336 GNAI1P63096 354 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 ITPK1Q13572 414 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 DCTN1Q14203 1278 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 ZNF598Q86UK7 904 aaKnown RBP8.95□□□□□ -0.98
LINC00347-201ENST00000451336 FAM9BQ8IZU0 186 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 ZNF496Q96IT1 587 aaPredicted RBP8.95□□□□□ -0.98
LINC00347-201ENST00000451336 IFT57Q9NWB7 429 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 TFCP2L1Q9NZI6 479 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 TSPYL4Q9UJ04 414 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 RRP7AQ9Y3A4 280 aaKnown RBP8.95□□□□□ -0.98
LINC00347-201ENST00000451336 TAF1LQ8IZX4 1826 aa8.95□□□□□ -0.98
LINC00347-201ENST00000451336 CCDC85CA6NKD9 419 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
LINC00347-201ENST00000451336 SLC39A6Q13433 755 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 QPCTQ16769 361 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 ZNF827Q17R98 1081 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 WDR63Q8IWG1 891 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 C16orf71Q8IYS4 520 aaPredicted RBP8.94□□□□□ -0.98
LINC00347-201ENST00000451336 LINC00116Q8NCU8 138 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
LINC00347-201ENST00000451336 RTCBQ9Y3I0 505 aaKnown RBP8.94□□□□□ -0.98
LINC00347-201ENST00000451336 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 LAMB4A4D0S4 1761 aa8.94□□□□□ -0.98
LINC00347-201ENST00000451336 CFAP99D6REC4 459 aa8.93□□□□□ -0.98
LINC00347-201ENST00000451336 CHL1O00533 1208 aa8.93□□□□□ -0.98
LINC00347-201ENST00000451336 CYP19A1P11511 503 aaPredicted RBP8.93□□□□□ -0.98
LINC00347-201ENST00000451336 CRKLP46109 303 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms