RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 ARHGAP27Q6ZUM4 889 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
VPS33A-202ENST00000451053 SIL1Q9H173 461 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 COPRSQ9NQ92 184 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 FER1L6Q2WGJ9 1857 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 LTBP1Q14766 1721 aa16.22■□□□□ 0.19
VPS33A-202ENST00000451053 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 NFKBIEO00221 500 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 RASSF7Q02833 373 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 CHRNDQ07001 517 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 TMX4Q9H1E5 349 aaPredicted RBP16.21■□□□□ 0.19
VPS33A-202ENST00000451053 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
VPS33A-202ENST00000451053 A0A1B0GUL6 1792 aa16.21■□□□□ 0.18
VPS33A-202ENST00000451053 EYA2O00167 538 aa16.2■□□□□ 0.18
VPS33A-202ENST00000451053 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
VPS33A-202ENST00000451053 ATG9AQ7Z3C6 839 aa16.2■□□□□ 0.18
VPS33A-202ENST00000451053 RTKN2Q8IZC4 609 aa16.2■□□□□ 0.18
VPS33A-202ENST00000451053 MPNDQ8N594 471 aa16.2■□□□□ 0.18
VPS33A-202ENST00000451053 HELBQ8NG08 1087 aaPredicted RBP16.2■□□□□ 0.18
VPS33A-202ENST00000451053 NSFL1CQ9UNZ2 370 aaKnown RBP16.2■□□□□ 0.18
VPS33A-202ENST00000451053 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
VPS33A-202ENST00000451053 PPP4R2Q9NY27 417 aa16.19■□□□□ 0.18
VPS33A-202ENST00000451053 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
VPS33A-202ENST00000451053 ANKIB1Q9P2G1 1089 aa16.19■□□□□ 0.18
VPS33A-202ENST00000451053 XDHP47989 1333 aa16.19■□□□□ 0.18
VPS33A-202ENST00000451053 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-202ENST00000451053 TAF5LO75529 589 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 CIAO1O76071 339 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 PRELPP51888 382 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 FKBP4Q02790 459 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS33A-202ENST00000451053 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 PSMD1Q99460 953 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
VPS33A-202ENST00000451053 TAOK3Q9H2K8 898 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 POLLQ9UGP5 575 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 LTBP3Q9NS15 1303 aa16.18■□□□□ 0.18
VPS33A-202ENST00000451053 SNAP23O00161 211 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 HMMRO75330 724 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 UFL1O94874 794 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 METTL24Q5JXM2 366 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 TBC1D16Q8TBP0 767 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-202ENST00000451053 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
VPS33A-202ENST00000451053 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 MROH5Q6ZUA9 1318 aa16.17■□□□□ 0.18
VPS33A-202ENST00000451053 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
VPS33A-202ENST00000451053 IL15P40933 162 aaPredicted RBP16.16■□□□□ 0.18
VPS33A-202ENST00000451053 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
VPS33A-202ENST00000451053 EXOC6BQ9Y2D4 811 aa16.16■□□□□ 0.18
VPS33A-202ENST00000451053 NOP58Q9Y2X3 529 aaKnown RBP16.16■□□□□ 0.18
VPS33A-202ENST00000451053 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
VPS33A-202ENST00000451053 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
VPS33A-202ENST00000451053 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.18
VPS33A-202ENST00000451053 SASH1O94885 1247 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 PDE8BO95263 885 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 KLRK1P26718 216 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 TFCP2Q12800 502 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 OS9Q13438 667 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-202ENST00000451053 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 LEMD3Q9Y2U8 911 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.14■□□□□ 0.17
VPS33A-202ENST00000451053 COL4A5P29400 1685 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 SBF1O95248 1867 aa16.14■□□□□ 0.17
VPS33A-202ENST00000451053 LMNB1P20700 586 aa16.13■□□□□ 0.17
VPS33A-202ENST00000451053 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
VPS33A-202ENST00000451053 KCNJ4P48050 445 aa16.13■□□□□ 0.17
VPS33A-202ENST00000451053 AOC3Q16853 763 aa16.13■□□□□ 0.17
VPS33A-202ENST00000451053 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
VPS33A-202ENST00000451053 CEP126Q9P2H0 1117 aa16.13■□□□□ 0.17
VPS33A-202ENST00000451053 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 TXNRD3Q86VQ6 643 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 EYA3Q99504 573 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 RNF181Q9P0P0 153 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
VPS33A-202ENST00000451053 APBB1O00213 710 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 FGFR2P21802 821 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
VPS33A-202ENST00000451053 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 PUM3Q15397 648 aaKnown RBP16.11■□□□□ 0.17
VPS33A-202ENST00000451053 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
VPS33A-202ENST00000451053 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
VPS33A-202ENST00000451053 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
VPS33A-202ENST00000451053 ZC3H12CQ9C0D7 883 aaKnown RBP16.1■□□□□ 0.17
VPS33A-202ENST00000451053 ZNF609O15014 1411 aa16.1■□□□□ 0.17
VPS33A-202ENST00000451053 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms