RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 MBIPQ9NS73 344 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 TLL2Q9Y6L7 1015 aa13.24□□□□□ -0.29
LINC01004-202ENST00000450686 PSMD14O00487 310 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 CCDC85AQ96PX6 553 aaPredicted RBP13.23□□□□□ -0.29
LINC01004-202ENST00000450686 ZIC5Q96T25 663 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
LINC01004-202ENST00000450686 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 CNOT7Q9UIV1 285 aaKnown RBP13.23□□□□□ -0.29
LINC01004-202ENST00000450686 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
LINC01004-202ENST00000450686 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
LINC01004-202ENST00000450686 C6orf229H3BNL8 230 aa13.22□□□□□ -0.29
LINC01004-202ENST00000450686 TBC1D10BQ4KMP7 808 aaPredicted RBP13.22□□□□□ -0.29
LINC01004-202ENST00000450686 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
LINC01004-202ENST00000450686 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
LINC01004-202ENST00000450686 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
LINC01004-202ENST00000450686 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
LINC01004-202ENST00000450686 ASTN2O75129 1339 aaPredicted RBP13.21□□□□□ -0.29
LINC01004-202ENST00000450686 SPEF2Q9C093 1822 aa13.21□□□□□ -0.29
LINC01004-202ENST00000450686 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
LINC01004-202ENST00000450686 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.29
LINC01004-202ENST00000450686 SAPCD2Q86UD0 394 aa13.21□□□□□ -0.29
LINC01004-202ENST00000450686 ABHD8Q96I13 439 aa13.21□□□□□ -0.29
LINC01004-202ENST00000450686 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
LINC01004-202ENST00000450686 ADM5C9JUS6 153 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 APAF1O14727 1248 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 ECE2O60344 883 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 TNIP1Q15025 636 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 MYD88Q99836 296 aa13.2□□□□□ -0.3
LINC01004-202ENST00000450686 ECE1P42892 770 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
LINC01004-202ENST00000450686 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 VPS33BQ9H267 617 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
LINC01004-202ENST00000450686 WTIPA6NIX2 430 aaPredicted RBP13.18□□□□□ -0.3
LINC01004-202ENST00000450686 H7C1D1 291 aa13.18□□□□□ -0.3
LINC01004-202ENST00000450686 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
LINC01004-202ENST00000450686 UFL1O94874 794 aa13.17□□□□□ -0.3
LINC01004-202ENST00000450686 HOXB7P09629 217 aa13.17□□□□□ -0.3
LINC01004-202ENST00000450686 ZNF853P0CG23 659 aa13.17□□□□□ -0.3
LINC01004-202ENST00000450686 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
LINC01004-202ENST00000450686 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
LINC01004-202ENST00000450686 SCAF8Q9UPN6 1271 aaKnown RBP13.17□□□□□ -0.3
LINC01004-202ENST00000450686 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 HUNKP57058 714 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 RPS8P62241 208 aaKnown RBP13.16□□□□□ -0.3
LINC01004-202ENST00000450686 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 KRT26Q7Z3Y9 468 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
LINC01004-202ENST00000450686 TSPYL6Q8N831 410 aa13.16□□□□□ -0.3
LINC01004-202ENST00000450686 PRKRIP1Q9H875 184 aaPredicted RBP13.16□□□□□ -0.3
LINC01004-202ENST00000450686 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
LINC01004-202ENST00000450686 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
LINC01004-202ENST00000450686 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
LINC01004-202ENST00000450686 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
LINC01004-202ENST00000450686 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
LINC01004-202ENST00000450686 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
LINC01004-202ENST00000450686 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
LINC01004-202ENST00000450686 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
LINC01004-202ENST00000450686 MAP2K2P36507 400 aa13.14□□□□□ -0.31
LINC01004-202ENST00000450686 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
LINC01004-202ENST00000450686 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
LINC01004-202ENST00000450686 PSME4Q14997 1843 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
LINC01004-202ENST00000450686 KIF4BQ2VIQ3 1234 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 DPF2Q92785 391 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 EYA3Q99504 573 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
LINC01004-202ENST00000450686 MCOLN1Q9GZU1 580 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
LINC01004-202ENST00000450686 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
LINC01004-202ENST00000450686 MYH3P11055 1940 aa13.12□□□□□ -0.31
LINC01004-202ENST00000450686 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
LINC01004-202ENST00000450686 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
LINC01004-202ENST00000450686 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
LINC01004-202ENST00000450686 GNAI1P63096 354 aa13.12□□□□□ -0.31
LINC01004-202ENST00000450686 G2E3Q7L622 706 aa13.12□□□□□ -0.31
LINC01004-202ENST00000450686 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
LINC01004-202ENST00000450686 GGA1Q9UJY5 639 aa13.12□□□□□ -0.31
LINC01004-202ENST00000450686 G3V3G9 751 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 PDE8AO60658 829 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 PCCAP05165 728 aaPredicted RBP13.11□□□□□ -0.31
LINC01004-202ENST00000450686 IGKV5-2P06315 115 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
LINC01004-202ENST00000450686 CWF19L2Q2TBE0 894 aaKnown RBP13.11□□□□□ -0.31
LINC01004-202ENST00000450686 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 DCAF8Q5TAQ9 597 aa13.11□□□□□ -0.31
LINC01004-202ENST00000450686 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms