RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
LINC01961-201ENST00000449954 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
LINC01961-201ENST00000449954 MFSD10Q14728 455 aa10.83□□□□□ -0.68
LINC01961-201ENST00000449954 CLEC4GQ6UXB4 293 aa10.83□□□□□ -0.68
LINC01961-201ENST00000449954 TPTE2Q6XPS3 522 aa10.83□□□□□ -0.68
LINC01961-201ENST00000449954 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
LINC01961-201ENST00000449954 GMPSP49915 693 aaPredicted RBP10.82□□□□□ -0.68
LINC01961-201ENST00000449954 CDCA8Q53HL2 280 aa10.82□□□□□ -0.68
LINC01961-201ENST00000449954 CEP290O15078 2479 aa10.82□□□□□ -0.68
LINC01961-201ENST00000449954 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
LINC01961-201ENST00000449954 PPIP5K2O43314 1243 aa10.81□□□□□ -0.68
LINC01961-201ENST00000449954 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
LINC01961-201ENST00000449954 MMRN1Q13201 1228 aa10.81□□□□□ -0.68
LINC01961-201ENST00000449954 CRY2Q49AN0 593 aa10.81□□□□□ -0.68
LINC01961-201ENST00000449954 USP48Q86UV5 1035 aa10.81□□□□□ -0.68
LINC01961-201ENST00000449954 DZIP3Q86Y13 1208 aaKnown RBP10.81□□□□□ -0.68
LINC01961-201ENST00000449954 CARD14Q9BXL6 1004 aa10.81□□□□□ -0.68
LINC01961-201ENST00000449954 HEG1Q9ULI3 1381 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 CXCL9Q07325 125 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 NEUROD1Q13562 356 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 KRT26Q7Z3Y9 468 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 AEBP1Q8IUX7 1158 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 TRPM4Q8TD43 1214 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 BCL2L13Q9BXK5 485 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 LGR6Q9HBX8 967 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 ZNRF3Q9ULT6 936 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 RIC1Q4ADV7 1423 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 PAPPA2Q9BXP8 1791 aa10.8□□□□□ -0.68
LINC01961-201ENST00000449954 UNC80Q8N2C7 3258 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 GPR25O00155 361 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 MAP3K9P80192 1104 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 TNIP1Q15025 636 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 RASAL3Q86YV0 1011 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 KIF7Q2M1P5 1343 aa10.79□□□□□ -0.68
LINC01961-201ENST00000449954 H7C1D1 291 aa10.78□□□□□ -0.68
LINC01961-201ENST00000449954 FKTNO75072 461 aa10.78□□□□□ -0.68
LINC01961-201ENST00000449954 AOC3Q16853 763 aa10.78□□□□□ -0.68
LINC01961-201ENST00000449954 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
LINC01961-201ENST00000449954 KIAA0100Q14667 2235 aaKnown RBP10.78□□□□□ -0.68
LINC01961-201ENST00000449954 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
LINC01961-201ENST00000449954 TBC1D8O95759 1140 aa10.77□□□□□ -0.69
LINC01961-201ENST00000449954 GTF2E1P29083 439 aaPredicted RBP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 FKBP1BP68106 108 aa10.77□□□□□ -0.69
LINC01961-201ENST00000449954 SULT6B1Q6IMI4 303 aa10.77□□□□□ -0.69
LINC01961-201ENST00000449954 SUPT20HQ8NEM7 779 aa10.77□□□□□ -0.69
LINC01961-201ENST00000449954 RPGRQ92834 1020 aaKnown RBP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 DCPSQ96C86 337 aaKnown RBP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 ZNF496Q96IT1 587 aaPredicted RBP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 CFHR5Q9BXR6 569 aa10.77□□□□□ -0.69
LINC01961-201ENST00000449954 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 NIP7Q9Y221 180 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC01961-201ENST00000449954 PPEF1O14829 653 aaPredicted RBP10.76□□□□□ -0.69
LINC01961-201ENST00000449954 HOXA10P31260 410 aaPredicted RBP10.76□□□□□ -0.69
LINC01961-201ENST00000449954 PPP4R3BQ5MIZ7 849 aa10.76□□□□□ -0.69
LINC01961-201ENST00000449954 EMILIN3Q9NT22 766 aa10.76□□□□□ -0.69
LINC01961-201ENST00000449954 EVI5O60447 810 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 PBX2P40425 430 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 TNNT2P45379 298 aaPredicted RBP10.75□□□□□ -0.69
LINC01961-201ENST00000449954 ZNF790Q6PG37 636 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 DPF2Q92785 391 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 NYXQ9GZU5 481 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
LINC01961-201ENST00000449954 ADM5C9JUS6 153 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 H0YGN5 161 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 RAD17O75943 681 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 A1BGP04217 495 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 LSM11P83369 360 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01961-201ENST00000449954 DLK2Q6UY11 383 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 SULF1Q8IWU6 871 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 CRAMP1Q96RY5 1269 aa10.74□□□□□ -0.69
LINC01961-201ENST00000449954 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
LINC01961-201ENST00000449954 ARHGAP33O14559 1287 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
LINC01961-201ENST00000449954 TM4SF4P48230 202 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 KIAA2012Q0VF49 1180 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 SREBF2Q12772 1141 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 POTEEQ6S8J3 1075 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 ARMC5Q96C12 935 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
LINC01961-201ENST00000449954 TRIM17Q9Y577 477 aa10.73□□□□□ -0.69
LINC01961-201ENST00000449954 IBTKQ9P2D0 1353 aaPredicted RBP10.73□□□□□ -0.69
LINC01961-201ENST00000449954 FAM177BA6PVY3 158 aa10.72□□□□□ -0.69
LINC01961-201ENST00000449954 OTOP1Q7RTM1 612 aa10.72□□□□□ -0.69
LINC01961-201ENST00000449954 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
LINC01961-201ENST00000449954 VCANP13611 3396 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 SHTN1A0MZ66 631 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 SIPA1L3O60292 1781 aaPredicted RBP10.71□□□□□ -0.69
LINC01961-201ENST00000449954 ALDH1A1P00352 501 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 RPS12P25398 132 aaKnown RBP10.71□□□□□ -0.69
LINC01961-201ENST00000449954 TEFQ10587 303 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 TBC1D10BQ4KMP7 808 aaPredicted RBP10.71□□□□□ -0.69
LINC01961-201ENST00000449954 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 CDCA5Q96FF9 252 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 GGA3Q9NZ52 723 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 ATP6V0A2Q9Y487 856 aa10.71□□□□□ -0.69
LINC01961-201ENST00000449954 DPP8Q6V1X1 898 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms