RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 CASP7P55210 303 aa16.68■□□□□ 0.26
SEC22C-209ENST00000449617 CNTROBQ8N137 903 aa16.68■□□□□ 0.26
SEC22C-209ENST00000449617 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
SEC22C-209ENST00000449617 CDC5LQ99459 802 aaKnown RBP16.68■□□□□ 0.26
SEC22C-209ENST00000449617 GGA1Q9UJY5 639 aa16.68■□□□□ 0.26
SEC22C-209ENST00000449617 SCN9AQ15858 1988 aa16.67■□□□□ 0.26
SEC22C-209ENST00000449617 ECE2O60344 883 aa16.67■□□□□ 0.26
SEC22C-209ENST00000449617 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
SEC22C-209ENST00000449617 USP50Q70EL3 339 aaPredicted RBP16.67■□□□□ 0.26
SEC22C-209ENST00000449617 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
SEC22C-209ENST00000449617 BCL2L13Q9BXK5 485 aa16.67■□□□□ 0.26
SEC22C-209ENST00000449617 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
SEC22C-209ENST00000449617 XDHP47989 1333 aa16.66■□□□□ 0.26
SEC22C-209ENST00000449617 PSMD14O00487 310 aa16.65■□□□□ 0.26
SEC22C-209ENST00000449617 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
SEC22C-209ENST00000449617 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
SEC22C-209ENST00000449617 SHTN1A0MZ66 631 aa16.64■□□□□ 0.25
SEC22C-209ENST00000449617 TMEM88BA6NKF7 163 aa16.64■□□□□ 0.25
SEC22C-209ENST00000449617 E9PSI1 815 aa16.64■□□□□ 0.25
SEC22C-209ENST00000449617 FAM161AQ3B820 660 aa16.64■□□□□ 0.25
SEC22C-209ENST00000449617 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.25
SEC22C-209ENST00000449617 BSDC1Q9NW68 430 aaPredicted RBP16.64■□□□□ 0.25
SEC22C-209ENST00000449617 MKRN1Q9UHC7 482 aaKnown RBP16.64■□□□□ 0.25
SEC22C-209ENST00000449617 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
SEC22C-209ENST00000449617 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
SEC22C-209ENST00000449617 MINPP1Q9UNW1 487 aa16.63■□□□□ 0.25
SEC22C-209ENST00000449617 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 CSF1RP07333 972 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 ITGA6P23229 1130 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 MICALL2Q8IY33 904 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 CNOT7Q9UIV1 285 aaKnown RBP16.62■□□□□ 0.25
SEC22C-209ENST00000449617 TRPM7Q96QT4 1865 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 PSME4Q14997 1843 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 CNTNAP1P78357 1384 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 G3V3G9 751 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 IGHMBP2P38935 993 aaKnown RBP16.62■□□□□ 0.25
SEC22C-209ENST00000449617 FMR1Q06787 632 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEC22C-209ENST00000449617 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 DCAF8Q5TAQ9 597 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 DPF2Q92785 391 aa16.62■□□□□ 0.25
SEC22C-209ENST00000449617 WTIPA6NIX2 430 aaPredicted RBP16.61■□□□□ 0.25
SEC22C-209ENST00000449617 H7C1D1 291 aa16.61■□□□□ 0.25
SEC22C-209ENST00000449617 TRAF5O00463 557 aa16.61■□□□□ 0.25
SEC22C-209ENST00000449617 HIRAP54198 1017 aaPredicted RBP16.61■□□□□ 0.25
SEC22C-209ENST00000449617 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
SEC22C-209ENST00000449617 GRM8O00222 908 aa16.6■□□□□ 0.25
SEC22C-209ENST00000449617 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
SEC22C-209ENST00000449617 FOXO4P98177 505 aa16.6■□□□□ 0.25
SEC22C-209ENST00000449617 MRPL50Q8N5N7 158 aaKnown RBP16.6■□□□□ 0.25
SEC22C-209ENST00000449617 CDCA7LQ96GN5 454 aa16.6■□□□□ 0.25
SEC22C-209ENST00000449617 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
SEC22C-209ENST00000449617 ALDH1L1O75891 902 aa16.59■□□□□ 0.25
SEC22C-209ENST00000449617 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
SEC22C-209ENST00000449617 CCT4P50991 539 aaKnown RBP16.59■□□□□ 0.25
SEC22C-209ENST00000449617 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
SEC22C-209ENST00000449617 SRCIN1Q9C0H9 1055 aa16.59■□□□□ 0.25
SEC22C-209ENST00000449617 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SEC22C-209ENST00000449617 ANKRD18BA2A2Z9 1011 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 EGFRP00533 1210 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 SAMD7Q7Z3H4 446 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 ZC3H15Q8WU90 426 aaKnown RBP16.58■□□□□ 0.24
SEC22C-209ENST00000449617 SSH1Q8WYL5 1049 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 GLIS2Q9BZE0 524 aaPredicted RBP16.58■□□□□ 0.24
SEC22C-209ENST00000449617 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
SEC22C-209ENST00000449617 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 ABT1Q9ULW3 272 aaKnown RBP16.58■□□□□ 0.24
SEC22C-209ENST00000449617 A0A1B0GUL6 1792 aa16.58■□□□□ 0.24
SEC22C-209ENST00000449617 ZNF609O15014 1411 aa16.57■□□□□ 0.24
SEC22C-209ENST00000449617 HSPA1AP0DMV8 641 aaKnown RBP16.57■□□□□ 0.24
SEC22C-209ENST00000449617 HSPA1BP0DMV9 641 aaKnown RBP16.57■□□□□ 0.24
SEC22C-209ENST00000449617 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
SEC22C-209ENST00000449617 TBC1D10BQ4KMP7 808 aaPredicted RBP16.57■□□□□ 0.24
SEC22C-209ENST00000449617 LMBR1LQ6UX01 489 aa16.57■□□□□ 0.24
SEC22C-209ENST00000449617 VEGFBP49765 207 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 CST9Q5W186 159 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
SEC22C-209ENST00000449617 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 POLR2AP24928 1970 aaKnown RBP16.56■□□□□ 0.24
SEC22C-209ENST00000449617 ZNF646O15015 1829 aaPredicted RBP16.56■□□□□ 0.24
SEC22C-209ENST00000449617 ZNF804BA4D1E1 1349 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 PTPRCP08575 1304 aa16.56■□□□□ 0.24
SEC22C-209ENST00000449617 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 RASSF10A6NK89 507 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 KLRK1P26718 216 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 CHRNDQ07001 517 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
SEC22C-209ENST00000449617 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
SEC22C-209ENST00000449617 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
SEC22C-209ENST00000449617 KCNJ4P48050 445 aa16.54■□□□□ 0.24
SEC22C-209ENST00000449617 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
SEC22C-209ENST00000449617 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
SEC22C-209ENST00000449617 AGBL3Q8NEM8 1001 aa16.54■□□□□ 0.24
SEC22C-209ENST00000449617 CELF2O95319 508 aaKnown RBP16.53■□□□□ 0.24
SEC22C-209ENST00000449617 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms