RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-203ENST00000449575 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
CCDC171-203ENST00000449575 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
CCDC171-203ENST00000449575 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.44
CCDC171-203ENST00000449575 ANKRD18BA2A2Z9 1011 aa12.27□□□□□ -0.45
CCDC171-203ENST00000449575 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
CCDC171-203ENST00000449575 SIRT2Q8IXJ6 389 aa12.27□□□□□ -0.45
CCDC171-203ENST00000449575 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 PRELPP51888 382 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 ANKRD18AQ8IVF6 992 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 SNAP23O00161 211 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 RASSF7Q02833 373 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 PTPN12Q05209 780 aaKnown RBP12.26□□□□□ -0.45
CCDC171-203ENST00000449575 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 ATP6V0A2Q9Y487 856 aa12.26□□□□□ -0.45
CCDC171-203ENST00000449575 BBOX1O75936 387 aa12.25□□□□□ -0.45
CCDC171-203ENST00000449575 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-203ENST00000449575 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
CCDC171-203ENST00000449575 SIL1Q9H173 461 aa12.25□□□□□ -0.45
CCDC171-203ENST00000449575 NFKBIEO00221 500 aa12.25□□□□□ -0.45
CCDC171-203ENST00000449575 MTX1Q13505 466 aa12.25□□□□□ -0.45
CCDC171-203ENST00000449575 GPR101Q96P66 508 aaPredicted RBP12.25□□□□□ -0.45
CCDC171-203ENST00000449575 PCDHB15Q9Y5E8 787 aa12.25□□□□□ -0.45
CCDC171-203ENST00000449575 ARHGAP27Q6ZUM4 889 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 MINPP1Q9UNW1 487 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
CCDC171-203ENST00000449575 CHD4Q14839 1912 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 GPSM2P81274 684 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 LDHAL6AQ6ZMR3 332 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 SP8Q8IXZ3 490 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 MPHOSPH8Q99549 860 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 BSDC1Q9NW68 430 aaPredicted RBP12.24□□□□□ -0.45
CCDC171-203ENST00000449575 TAF5LO75529 589 aa12.24□□□□□ -0.45
CCDC171-203ENST00000449575 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
CCDC171-203ENST00000449575 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
CCDC171-203ENST00000449575 DICER1Q9UPY3 1922 aaKnown RBP12.23□□□□□ -0.45
CCDC171-203ENST00000449575 COL4A5P29400 1685 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 POLA2Q14181 598 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 ATG9AQ7Z3C6 839 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 SSH3Q8TE77 659 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.23□□□□□ -0.45
CCDC171-203ENST00000449575 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 CHRNDQ07001 517 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 POLLQ9UGP5 575 aa12.23□□□□□ -0.45
CCDC171-203ENST00000449575 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
CCDC171-203ENST00000449575 CNNM1Q9NRU3 951 aa12.22□□□□□ -0.45
CCDC171-203ENST00000449575 HDAC5Q9UQL6 1122 aa12.22□□□□□ -0.45
CCDC171-203ENST00000449575 KLRK1P26718 216 aa12.21□□□□□ -0.45
CCDC171-203ENST00000449575 MPNDQ8N594 471 aa12.21□□□□□ -0.45
CCDC171-203ENST00000449575 COPRSQ9NQ92 184 aa12.21□□□□□ -0.45
CCDC171-203ENST00000449575 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
CCDC171-203ENST00000449575 DPP8Q6V1X1 898 aaPredicted RBP12.21□□□□□ -0.46
CCDC171-203ENST00000449575 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 EYA2O00167 538 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 VGLL2Q8N8G2 317 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
CCDC171-203ENST00000449575 GRIN3BO60391 1043 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
CCDC171-203ENST00000449575 UFL1O94874 794 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 FKBP4Q02790 459 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC171-203ENST00000449575 RPAP2Q8IXW5 612 aaPredicted RBP12.19□□□□□ -0.46
CCDC171-203ENST00000449575 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 XDHP47989 1333 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 SASH1O94885 1247 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 AOC3Q16853 763 aa12.19□□□□□ -0.46
CCDC171-203ENST00000449575 APBB1O00213 710 aa12.18□□□□□ -0.46
CCDC171-203ENST00000449575 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
CCDC171-203ENST00000449575 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
CCDC171-203ENST00000449575 CC2D2BQ6DHV5 1058 aa12.18□□□□□ -0.46
CCDC171-203ENST00000449575 RTFDC1Q9BY42 306 aaPredicted RBP12.18□□□□□ -0.46
CCDC171-203ENST00000449575 CHMP4BQ9H444 224 aaKnown RBP12.18□□□□□ -0.46
CCDC171-203ENST00000449575 PSMD1Q99460 953 aa12.18□□□□□ -0.46
CCDC171-203ENST00000449575 TFCP2Q12800 502 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
CCDC171-203ENST00000449575 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 CIAO1O76071 339 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 PDE8BO95263 885 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 ZNF804BA4D1E1 1349 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 LTBP3Q9NS15 1303 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 IRS2Q9Y4H2 1338 aa12.17□□□□□ -0.46
CCDC171-203ENST00000449575 IGHDP01880 384 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
CCDC171-203ENST00000449575 RNF181Q9P0P0 153 aa12.16□□□□□ -0.46
CCDC171-203ENST00000449575 ZNF646O15015 1829 aaPredicted RBP12.16□□□□□ -0.46
CCDC171-203ENST00000449575 MROH5Q6ZUA9 1318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms