RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CHADLQ6NUI6 762 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 GPR101Q96P66 508 aaPredicted RBP17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 KCNQ5Q9NR82 932 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 RIMBP2O15034 1052 aa17.85■□□□□ 0.45
RTFDC1-204ENST00000449062 FAM161AQ3B820 660 aa17.85■□□□□ 0.45
RTFDC1-204ENST00000449062 BCL2L13Q9BXK5 485 aa17.85■□□□□ 0.45
RTFDC1-204ENST00000449062 ANKIB1Q9P2G1 1089 aa17.85■□□□□ 0.45
RTFDC1-204ENST00000449062 SCN4AP35499 1836 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 XDHP47989 1333 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 RAD17O75943 681 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 ITGBL1O95965 494 aaPredicted RBP17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 NBPF7P0C2Y1 421 aaPredicted RBP17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 CIAPIN1Q6FI81 312 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 LDHDQ86WU2 507 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 EYA3Q99504 573 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 GGA1Q9UJY5 639 aa17.84■□□□□ 0.45
RTFDC1-204ENST00000449062 UFL1O94874 794 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 ATP2B4P23634 1241 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 TNIP1Q15025 636 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 DOK7Q18PE1 504 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 USP44Q9H0E7 712 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 DBNDD1Q9H9R9 158 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 GPRC5DQ9NZD1 345 aa17.83■□□□□ 0.44
RTFDC1-204ENST00000449062 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
RTFDC1-204ENST00000449062 HTRA3P83110 453 aa17.82■□□□□ 0.44
RTFDC1-204ENST00000449062 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
RTFDC1-204ENST00000449062 SMC4Q9NTJ3 1288 aa17.82■□□□□ 0.44
RTFDC1-204ENST00000449062 ECE2O60344 883 aa17.81■□□□□ 0.44
RTFDC1-204ENST00000449062 IGHMBP2P38935 993 aaKnown RBP17.81■□□□□ 0.44
RTFDC1-204ENST00000449062 PASKQ96RG2 1323 aa17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 ANKRD18BA2A2Z9 1011 aa17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 PSMD14O00487 310 aa17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 EAPPQ56P03 285 aaPredicted RBP17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 DPF2Q92785 391 aa17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
RTFDC1-204ENST00000449062 MYH3P11055 1940 aa17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 VIL1P09327 827 aaKnown RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 LMOD1P29536 600 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 HIRAP54198 1017 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 IFIT5Q13325 482 aaKnown RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 RABL6Q3YEC7 729 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 USP50Q70EL3 339 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 TXNRD3Q86VQ6 643 aa17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 PGAP2Q9UHJ9 254 aa17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 ZBTB12Q9Y330 459 aaPredicted RBP17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 ADAMTSL1Q8N6G6 1762 aa17.79■□□□□ 0.44
RTFDC1-204ENST00000449062 SHTN1A0MZ66 631 aa17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 HNRNPUQ00839 825 aaKnown RBP eCLIP17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 CHRNDQ07001 517 aa17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 ANKRD44Q8N8A2 993 aa17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 CNOT7Q9UIV1 285 aaKnown RBP17.78■□□□□ 0.44
RTFDC1-204ENST00000449062 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 MAP1SQ66K74 1059 aaPredicted RBP17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 PODNQ7Z5L7 613 aa17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 CNTROBQ8N137 903 aa17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 ARHGAP45Q92619 1136 aa17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 GMLQ99445 158 aa17.77■□□□□ 0.44
RTFDC1-204ENST00000449062 SNAP23O00161 211 aa17.76■□□□□ 0.43
RTFDC1-204ENST00000449062 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
RTFDC1-204ENST00000449062 CLEC11AQ9Y240 323 aa17.76■□□□□ 0.43
RTFDC1-204ENST00000449062 MED23Q9ULK4 1368 aa17.76■□□□□ 0.43
RTFDC1-204ENST00000449062 ZNF804BA4D1E1 1349 aa17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 RPS12P25398 132 aaKnown RBP17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 KLRK1P26718 216 aa17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 C15orf52Q6ZUT6 534 aaKnown RBP17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
RTFDC1-204ENST00000449062 TAF5LO75529 589 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 LDHAL6AQ6ZMR3 332 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 TRPM4Q8TD43 1214 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 API5Q9BZZ5 524 aaKnown RBP17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 RIPOR2Q9Y4F9 1068 aa17.74■□□□□ 0.43
RTFDC1-204ENST00000449062 H7C1D1 291 aa17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 BCAR3O75815 825 aa17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 EGFRP00533 1210 aa17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 ZC3H15Q8WU90 426 aaKnown RBP17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 KLRG1Q96E93 195 aa17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
RTFDC1-204ENST00000449062 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 RSBN1LQ6PCB5 846 aaPredicted RBP17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
RTFDC1-204ENST00000449062 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms