RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
SHMT2-203ENST00000449049 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-203ENST00000449049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.35■□□□□ 0.37
SHMT2-203ENST00000449049 BBOX1O75936 387 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 CHRNA5P30532 468 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 TFCP2Q12800 502 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 VGLL2Q8N8G2 317 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 LNPKQ9C0E8 428 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 CD2APQ9Y5K6 639 aa17.34■□□□□ 0.37
SHMT2-203ENST00000449049 TGFB2P61812 414 aa17.33■□□□□ 0.37
SHMT2-203ENST00000449049 TMC4Q7Z404 712 aa17.33■□□□□ 0.37
SHMT2-203ENST00000449049 IL1RAPL2Q9NP60 686 aa17.33■□□□□ 0.37
SHMT2-203ENST00000449049 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.37
SHMT2-203ENST00000449049 METTL24Q5JXM2 366 aa17.33■□□□□ 0.36
SHMT2-203ENST00000449049 GPR108Q9NPR9 543 aa17.33■□□□□ 0.36
SHMT2-203ENST00000449049 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
SHMT2-203ENST00000449049 CACNA1SQ13698 1873 aa17.33■□□□□ 0.36
SHMT2-203ENST00000449049 ZNF609O15014 1411 aa17.32■□□□□ 0.36
SHMT2-203ENST00000449049 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
SHMT2-203ENST00000449049 PDE4AP27815 886 aa17.32■□□□□ 0.36
SHMT2-203ENST00000449049 CHRNDQ07001 517 aa17.32■□□□□ 0.36
SHMT2-203ENST00000449049 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
SHMT2-203ENST00000449049 CNKSR1Q969H4 720 aa17.32■□□□□ 0.36
SHMT2-203ENST00000449049 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.36
SHMT2-203ENST00000449049 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
SHMT2-203ENST00000449049 PDE8BO95263 885 aa17.31■□□□□ 0.36
SHMT2-203ENST00000449049 DPEP1P16444 411 aa17.31■□□□□ 0.36
SHMT2-203ENST00000449049 KCNA3P22001 575 aa17.31■□□□□ 0.36
SHMT2-203ENST00000449049 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
SHMT2-203ENST00000449049 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
SHMT2-203ENST00000449049 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-203ENST00000449049 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-203ENST00000449049 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-203ENST00000449049 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
SHMT2-203ENST00000449049 A0A0G2JLW4 131 aa17.29■□□□□ 0.36
SHMT2-203ENST00000449049 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
SHMT2-203ENST00000449049 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
SHMT2-203ENST00000449049 ATP6V0A2Q9Y487 856 aa17.29■□□□□ 0.36
SHMT2-203ENST00000449049 PRPF40BQ6NWY9 871 aaKnown RBP17.29■□□□□ 0.36
SHMT2-203ENST00000449049 AACSQ86V21 672 aa17.29■□□□□ 0.36
SHMT2-203ENST00000449049 HELBQ8NG08 1087 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-203ENST00000449049 TAF5LO75529 589 aa17.28■□□□□ 0.36
SHMT2-203ENST00000449049 FGFR2P21802 821 aa17.28■□□□□ 0.36
SHMT2-203ENST00000449049 PUM3Q15397 648 aaKnown RBP17.28■□□□□ 0.36
SHMT2-203ENST00000449049 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
SHMT2-203ENST00000449049 OTUD7AQ8TE49 926 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-203ENST00000449049 PPP1R1BQ9UD71 204 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-203ENST00000449049 A0A1B0GUL7 405 aa17.27■□□□□ 0.35
SHMT2-203ENST00000449049 IFIT2P09913 472 aaKnown RBP17.27■□□□□ 0.35
SHMT2-203ENST00000449049 ATP2B3Q16720 1220 aa17.27■□□□□ 0.35
SHMT2-203ENST00000449049 TTLL6Q8N841 843 aa17.27■□□□□ 0.35
SHMT2-203ENST00000449049 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 KLHL34Q8N239 644 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 LPIN2Q92539 896 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 CCDC8Q9H0W5 538 aaPredicted RBP17.26■□□□□ 0.35
SHMT2-203ENST00000449049 PODXL2Q9NZ53 605 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 XDHP47989 1333 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 TIMM10P62072 90 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
SHMT2-203ENST00000449049 PIM2Q9P1W9 311 aa17.26■□□□□ 0.35
SHMT2-203ENST00000449049 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
SHMT2-203ENST00000449049 MX1P20591 662 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 RGS3P49796 1198 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 GPSM2P81274 684 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
SHMT2-203ENST00000449049 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 SLC5A1P13866 664 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 PDE1AP54750 535 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 NEUROD6Q96NK8 337 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 FHDC1Q9C0D6 1143 aaPredicted RBP17.24■□□□□ 0.35
SHMT2-203ENST00000449049 ANKIB1Q9P2G1 1089 aa17.24■□□□□ 0.35
SHMT2-203ENST00000449049 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 AOX1Q06278 1338 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 SNAP23O00161 211 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
SHMT2-203ENST00000449049 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 ADORA1P30542 326 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 CC2D2BQ6DHV5 1058 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 OLFM4Q6UX06 510 aa17.23■□□□□ 0.35
SHMT2-203ENST00000449049 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
SHMT2-203ENST00000449049 NSFL1CQ9UNZ2 370 aaKnown RBP17.23■□□□□ 0.35
SHMT2-203ENST00000449049 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
SHMT2-203ENST00000449049 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
SHMT2-203ENST00000449049 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms