RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 ARID5BQ14865 1188 aa16.15■□□□□ 0.18
POLR1B-209ENST00000448770 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
POLR1B-209ENST00000448770 GOLPH3LQ9H4A5 285 aa16.15■□□□□ 0.18
POLR1B-209ENST00000448770 COPRSQ9NQ92 184 aa16.15■□□□□ 0.18
POLR1B-209ENST00000448770 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.18
POLR1B-209ENST00000448770 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.18
POLR1B-209ENST00000448770 CACTINQ8WUQ7 758 aaKnown RBP16.14■□□□□ 0.18
POLR1B-209ENST00000448770 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
POLR1B-209ENST00000448770 ZNF165P49910 485 aa16.14■□□□□ 0.17
POLR1B-209ENST00000448770 NFATC2IPQ8NCF5 419 aa16.14■□□□□ 0.17
POLR1B-209ENST00000448770 C16orf45Q96MC5 204 aaPredicted RBP16.14■□□□□ 0.17
POLR1B-209ENST00000448770 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
POLR1B-209ENST00000448770 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
POLR1B-209ENST00000448770 ATP5J2-PTCD1G3V325 749 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
POLR1B-209ENST00000448770 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
POLR1B-209ENST00000448770 CBX1P83916 185 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 ANKRD7Q92527 254 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 TPM3P06753 285 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
POLR1B-209ENST00000448770 IQCB1Q15051 598 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 ERBB3P21860 1342 aa16.13■□□□□ 0.17
POLR1B-209ENST00000448770 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
POLR1B-209ENST00000448770 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
POLR1B-209ENST00000448770 ZSCAN20P17040 1043 aaPredicted RBP16.12■□□□□ 0.17
POLR1B-209ENST00000448770 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
POLR1B-209ENST00000448770 MYH15Q9Y2K3 1946 aa16.12■□□□□ 0.17
POLR1B-209ENST00000448770 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
POLR1B-209ENST00000448770 ERCC4Q92889 916 aaPredicted RBP16.12■□□□□ 0.17
POLR1B-209ENST00000448770 MEGF6O75095 1541 aa16.12■□□□□ 0.17
POLR1B-209ENST00000448770 CASP7P55210 303 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
POLR1B-209ENST00000448770 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
POLR1B-209ENST00000448770 NCOA5Q9HCD5 579 aaKnown RBP16.11■□□□□ 0.17
POLR1B-209ENST00000448770 LMTK3Q96Q04 1460 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 GLI3P10071 1580 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 ZC3H6P61129 1189 aaKnown RBP16.11■□□□□ 0.17
POLR1B-209ENST00000448770 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
POLR1B-209ENST00000448770 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 HAUS7Q99871 368 aa16.11■□□□□ 0.17
POLR1B-209ENST00000448770 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 USP27XA6NNY8 438 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 U2AF2P26368 475 aaKnown RBP eCLIP16.1■□□□□ 0.179e-7■■□□□ 14
POLR1B-209ENST00000448770 ANKRD13DQ6ZTN6 518 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 USP28Q96RU2 1077 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
POLR1B-209ENST00000448770 SNW1Q13573 536 aaKnown RBP16.1■□□□□ 0.17
POLR1B-209ENST00000448770 KRT32Q14532 448 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
POLR1B-209ENST00000448770 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
POLR1B-209ENST00000448770 H3BQV1 296 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 PFKFB2O60825 505 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 PHKG2P15735 406 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
POLR1B-209ENST00000448770 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 PTPDC1A2A3K4 754 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 GUCY1B3Q02153 619 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
POLR1B-209ENST00000448770 BCL11BQ9C0K0 894 aaPredicted RBP16.09■□□□□ 0.17
POLR1B-209ENST00000448770 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.17
POLR1B-209ENST00000448770 SALL1Q9NSC2 1324 aa16.08■□□□□ 0.16
POLR1B-209ENST00000448770 RFX7Q2KHR2 1363 aa16.08■□□□□ 0.16
POLR1B-209ENST00000448770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.08■□□□□ 0.16
POLR1B-209ENST00000448770 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
POLR1B-209ENST00000448770 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
POLR1B-209ENST00000448770 A0A087WZG4 1122 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 GOLIM4O00461 696 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 TNNT1P13805 278 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
POLR1B-209ENST00000448770 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
POLR1B-209ENST00000448770 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
POLR1B-209ENST00000448770 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
POLR1B-209ENST00000448770 ZSCAN16Q9H4T2 348 aaPredicted RBP16.07■□□□□ 0.16
POLR1B-209ENST00000448770 ZHX1Q9UKY1 873 aaPredicted RBP16.07■□□□□ 0.16
POLR1B-209ENST00000448770 FOXO4P98177 505 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 CYP27B1O15528 508 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 TIMM10P62072 90 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 DMTNQ08495 405 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 DHX32Q7L7V1 743 aaKnown RBP16.06■□□□□ 0.16
POLR1B-209ENST00000448770 ANKLE2Q86XL3 938 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 AGXT2Q9BYV1 514 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 NLRP2Q9NX02 1062 aa16.06■□□□□ 0.16
POLR1B-209ENST00000448770 ABCC6O95255 1503 aa16.05■□□□□ 0.16
POLR1B-209ENST00000448770 FDPSP14324 419 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms