RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 GSDMBQ8TAX9 411 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 MIPOL1Q8TD10 442 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 CDCA7LQ96GN5 454 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 EPSTI1Q96J88 318 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 FAM204AQ9H8W3 233 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 BIN1O00499 593 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 ATP5DP30049 168 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.91
LPP-208ENST00000448637 USH1CQ9Y6N9 552 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 STK10O94804 968 aaKnown RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 MAPK8IP2Q13387 824 aaPredicted RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 WTAPQ15007 396 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 KMT5BQ4FZB7 885 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 LDHAL6AQ6ZMR3 332 aa9.39□□□□□ -0.91
LPP-208ENST00000448637 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
LPP-208ENST00000448637 CUX1P39880 1505 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 TNPO1Q92973 898 aaKnown RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 STMN2Q93045 179 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 CCDC8Q9H0W5 538 aaPredicted RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 VCX3BQ9H321 246 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 SPDYE3A6NKU9 549 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 TMEM110-MUSTN1A8MSY1 372 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 CLGNO14967 610 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 CALCOCO2Q13137 446 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 MCM10Q7L590 875 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 PLS1Q14651 629 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 ESR2Q92731 530 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 RNF34Q969K3 372 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 BICDL2A1A5D9 508 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 RASA3Q14644 834 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 PPP1R7Q15435 360 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 NUF2Q9BZD4 464 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 SLC12A5Q9H2X9 1139 aa9.38□□□□□ -0.91
LPP-208ENST00000448637 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
LPP-208ENST00000448637 WDR46O15213 610 aaKnown RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 GTF2A1P52655 376 aaPredicted RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 MICU3Q86XE3 530 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 PANK2Q9BZ23 570 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.37□□□□□ -0.91
LPP-208ENST00000448637 E7EVH7 732 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 POLD1P28340 1107 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SYKP43405 635 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 ASIC1P78348 528 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 LACTBP83111 547 aaPredicted RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 RRS1Q15050 365 aaKnown RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 KRT86O43790 486 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 STX10O60499 249 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 ADAMTS2O95450 1211 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 KRT79Q5XKE5 535 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 NSMCE1Q8WV22 266 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 CALM1P0DP23 149 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 CALM2P0DP24 149 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 CALM3P0DP25 149 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SARNPP82979 210 aaKnown RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 IFIT1BQ5T764 474 aaKnown RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 NBPF6Q5VWK0 638 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SIRT1Q96EB6 747 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 NBPF4Q96M43 638 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 CCDC114Q96M63 670 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 ARFGAP3Q9NP61 516 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SEL1L2Q5TEA6 688 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 NBPF5PQ86XG9 351 aaPredicted RBP9.37□□□□□ -0.91
LPP-208ENST00000448637 NEK1Q96PY6 1258 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 SEPT10Q9P0V9 454 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 AFG3L2Q9Y4W6 797 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
LPP-208ENST00000448637 MGEA5O60502 916 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 STMN1P16949 149 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 ZNF165P49910 485 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 UBASH3AP57075 661 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 CPLX4Q7Z7G2 160 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 SRRTQ9BXP5 876 aaKnown RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 PLEKHH2Q8IVE3 1493 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 NAPAP54920 295 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 TNNC1P63316 161 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
LPP-208ENST00000448637 HEATR3Q7Z4Q2 680 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
LPP-208ENST00000448637 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms