RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 THSD7BQ9C0I4 1608 aa36.41■■■■□ 3.42
CBX4-202ENST00000448310 PI4KAP2A4QPH2 592 aa36.4■■■■□ 3.42
CBX4-202ENST00000448310 CELF2O95319 508 aaKnown RBP36.4■■■■□ 3.42
CBX4-202ENST00000448310 CCDC27Q2M243 656 aa36.4■■■■□ 3.42
CBX4-202ENST00000448310 KSR2Q6VAB6 950 aa36.4■■■■□ 3.42
CBX4-202ENST00000448310 PI4KAP1Q8N8J0 262 aa36.4■■■■□ 3.42
CBX4-202ENST00000448310 RTL9Q8NET4 1388 aa36.4■■■■□ 3.42
CBX4-202ENST00000448310 SAMD7Q7Z3H4 446 aa36.39■■■■□ 3.42
CBX4-202ENST00000448310 ZC3H15Q8WU90 426 aaKnown RBP36.39■■■■□ 3.42
CBX4-202ENST00000448310 PRDM10Q9NQV6 1147 aa36.39■■■■□ 3.42
CBX4-202ENST00000448310 ANKIB1Q9P2G1 1089 aa36.39■■■■□ 3.42
CBX4-202ENST00000448310 MYH3P11055 1940 aa36.39■■■■□ 3.42
CBX4-202ENST00000448310 UFL1O94874 794 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 IGKV5-2P06315 115 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 DPF2Q92785 391 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 STK31Q9BXU1 1019 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 ZNF408Q9H9D4 720 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 PODXL2Q9NZ53 605 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 POLR2AP24928 1970 aaKnown RBP36.38■■■■□ 3.41
CBX4-202ENST00000448310 SPEF2Q9C093 1822 aa36.38■■■■□ 3.41
CBX4-202ENST00000448310 LBX1P52954 281 aa36.37■■■■□ 3.41
CBX4-202ENST00000448310 TWISTNBQ3B726 338 aaPredicted RBP36.37■■■■□ 3.41
CBX4-202ENST00000448310 ZC3H12CQ9C0D7 883 aaKnown RBP36.37■■■■□ 3.41
CBX4-202ENST00000448310 ECE1P42892 770 aa36.36■■■■□ 3.41
CBX4-202ENST00000448310 MAP2K1Q02750 393 aaPredicted RBP36.36■■■■□ 3.41
CBX4-202ENST00000448310 TBC1D10BQ4KMP7 808 aaPredicted RBP36.36■■■■□ 3.41
CBX4-202ENST00000448310 G2E3Q7L622 706 aa36.36■■■■□ 3.41
CBX4-202ENST00000448310 EGFRP00533 1210 aa36.35■■■■□ 3.41
CBX4-202ENST00000448310 GGA1Q9UJY5 639 aa36.35■■■■□ 3.41
CBX4-202ENST00000448310 CDC37L1Q7L3B6 337 aa36.34■■■■□ 3.41
CBX4-202ENST00000448310 MRS2Q9HD23 443 aa36.34■■■■□ 3.41
CBX4-202ENST00000448310 HSPA8P11142 646 aaKnown RBP36.33■■■■□ 3.41
CBX4-202ENST00000448310 CWF19L2Q2TBE0 894 aaKnown RBP36.33■■■■□ 3.41
CBX4-202ENST00000448310 DLK2Q6UY11 383 aa36.33■■■■□ 3.41
CBX4-202ENST00000448310 SAPCD2Q86UD0 394 aa36.33■■■■□ 3.41
CBX4-202ENST00000448310 ANKRD18AQ8IVF6 992 aa36.33■■■■□ 3.41
CBX4-202ENST00000448310 CTSWP56202 376 aa36.32■■■■□ 3.4
CBX4-202ENST00000448310 RBM26Q5T8P6 1007 aaKnown RBP36.32■■■■□ 3.4
CBX4-202ENST00000448310 USP48Q86UV5 1035 aa36.32■■■■□ 3.4
CBX4-202ENST00000448310 G3V3G9 751 aa36.31■■■■□ 3.4
CBX4-202ENST00000448310 SLC4A2P04920 1241 aa36.31■■■■□ 3.4
CBX4-202ENST00000448310 RPS12P25398 132 aaKnown RBP36.31■■■■□ 3.4
CBX4-202ENST00000448310 NEXNQ0ZGT2 675 aa36.31■■■■□ 3.4
CBX4-202ENST00000448310 DCAF8Q5TAQ9 597 aa36.31■■■■□ 3.4
CBX4-202ENST00000448310 PSME4Q14997 1843 aa36.3■■■■□ 3.4
CBX4-202ENST00000448310 AOC2O75106 756 aa36.3■■■■□ 3.4
CBX4-202ENST00000448310 SALL2Q9Y467 1007 aaPredicted RBP36.3■■■■□ 3.4
CBX4-202ENST00000448310 IL16Q14005 1332 aa36.3■■■■□ 3.4
CBX4-202ENST00000448310 NEURL1BA8MQ27 555 aa36.29■■■■□ 3.4
CBX4-202ENST00000448310 TTLL11Q8NHH1 800 aa36.28■■■■□ 3.4
CBX4-202ENST00000448310 XDHP47989 1333 aa36.28■■■■□ 3.4
CBX4-202ENST00000448310 VIL1P09327 827 aaKnown RBP36.27■■■■□ 3.4
CBX4-202ENST00000448310 GREM2Q9H772 168 aa36.27■■■■□ 3.4
CBX4-202ENST00000448310 FANCIQ9NVI1 1328 aa36.27■■■■□ 3.4
CBX4-202ENST00000448310 CDC5LQ99459 802 aaKnown RBP36.26■■■■□ 3.4
CBX4-202ENST00000448310 WTIPA6NIX2 430 aaPredicted RBP36.25■■■■□ 3.39
CBX4-202ENST00000448310 UBE3BQ7Z3V4 1068 aa36.25■■■■□ 3.39
CBX4-202ENST00000448310 CACNA1FO60840 1977 aa36.25■■■■□ 3.39
CBX4-202ENST00000448310 ANP32CO43423 234 aa36.24■■■■□ 3.39
CBX4-202ENST00000448310 KIF4BQ2VIQ3 1234 aa36.24■■■■□ 3.39
CBX4-202ENST00000448310 KRT26Q7Z3Y9 468 aa36.24■■■■□ 3.39
CBX4-202ENST00000448310 ADM5C9JUS6 153 aa36.23■■■■□ 3.39
CBX4-202ENST00000448310 ATP2B4P23634 1241 aa36.23■■■■□ 3.39
CBX4-202ENST00000448310 FLIIQ13045 1269 aa36.23■■■■□ 3.39
CBX4-202ENST00000448310 BEGAINQ9BUH8 593 aa36.23■■■■□ 3.39
CBX4-202ENST00000448310 NCBP3Q53F19 620 aaKnown RBP36.22■■■■□ 3.39
CBX4-202ENST00000448310 HHIPL1Q96JK4 782 aa36.22■■■■□ 3.39
CBX4-202ENST00000448310 H7C1W4 665 aa36.21■■■■□ 3.39
CBX4-202ENST00000448310 MAP2K2P36507 400 aa36.21■■■■□ 3.39
CBX4-202ENST00000448310 ZEB1P37275 1124 aaPredicted RBP36.21■■■■□ 3.39
CBX4-202ENST00000448310 DCPSQ96C86 337 aaKnown RBP36.21■■■■□ 3.39
CBX4-202ENST00000448310 ASTN2O75129 1339 aaPredicted RBP36.2■■■■□ 3.39
CBX4-202ENST00000448310 RSBN1LQ6PCB5 846 aaPredicted RBP36.2■■■■□ 3.39
CBX4-202ENST00000448310 BSDC1Q9NW68 430 aaPredicted RBP36.2■■■■□ 3.39
CBX4-202ENST00000448310 TSKSQ9UJT2 592 aa36.2■■■■□ 3.39
CBX4-202ENST00000448310 MINPP1Q9UNW1 487 aa36.2■■■■□ 3.39
CBX4-202ENST00000448310 ZNF316A6NFI3 1004 aaPredicted RBP36.19■■■■□ 3.38
CBX4-202ENST00000448310 FKBP5Q13451 457 aaPredicted RBP36.19■■■■□ 3.38
CBX4-202ENST00000448310 HUNKP57058 714 aa36.18■■■■□ 3.38
CBX4-202ENST00000448310 GCKRQ14397 625 aa36.18■■■■□ 3.38
CBX4-202ENST00000448310 GGA3Q9NZ52 723 aa36.18■■■■□ 3.38
CBX4-202ENST00000448310 DNAAF4Q8WXU2 420 aa36.17■■■■□ 3.38
CBX4-202ENST00000448310 VAMP4O75379 141 aa36.16■■■■□ 3.38
CBX4-202ENST00000448310 EXOSC9Q06265 439 aaKnown RBP36.16■■■■□ 3.38
CBX4-202ENST00000448310 WDR63Q8IWG1 891 aa36.16■■■■□ 3.38
CBX4-202ENST00000448310 AGBL3Q8NEM8 1001 aa36.16■■■■□ 3.38
CBX4-202ENST00000448310 ZNF609O15014 1411 aa36.16■■■■□ 3.38
CBX4-202ENST00000448310 ZNF280AP59817 542 aaPredicted RBP36.15■■■■□ 3.38
CBX4-202ENST00000448310 MED23Q9ULK4 1368 aa36.15■■■■□ 3.38
CBX4-202ENST00000448310 ZNF646O15015 1829 aaPredicted RBP36.14■■■■□ 3.38
CBX4-202ENST00000448310 CCT4P50991 539 aaKnown RBP36.14■■■■□ 3.38
CBX4-202ENST00000448310 PODNQ7Z5L7 613 aa36.14■■■■□ 3.38
CBX4-202ENST00000448310 GBA2Q9HCG7 927 aaPredicted RBP36.14■■■■□ 3.38
CBX4-202ENST00000448310 USP17L3A6NCW0 530 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 USP17L4A6NCW7 530 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 CASP7P55210 303 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 FAM161AQ3B820 660 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 USP17L1Q7RTZ2 530 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 ZIC5Q96T25 663 aa36.13■■■■□ 3.37
CBX4-202ENST00000448310 GMLQ99445 158 aa36.13■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms