RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ATP6V0A2Q9Y487 856 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 SLC8A1P32418 973 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 AMOTQ4VCS5 1084 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 TMCO5AQ8N6Q1 288 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 PDXDC1Q6P996 788 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 IQCA1Q86XH1 822 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 SCHIP1Q9P0W5 487 aaPredicted RBP10.09□□□□□ -0.79
NIPBL-202ENST00000448238 CCT4P50991 539 aaKnown RBP10.09□□□□□ -0.79
NIPBL-202ENST00000448238 CAMK4Q16566 473 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 VPS18Q9P253 973 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 NUP155O75694 1391 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 SKILP12757 684 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 ZNF131P52739 623 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 EVI5LQ96CN4 794 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 CCDC138Q96M89 665 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
NIPBL-202ENST00000448238 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
NIPBL-202ENST00000448238 NOP14P78316 857 aaKnown RBP10.09□□□□□ -0.79
NIPBL-202ENST00000448238 TERF1P54274 439 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 PSME1Q06323 249 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 MCM10Q7L590 875 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
NIPBL-202ENST00000448238 PCYT1AP49585 367 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 RASEFQ8IZ41 740 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 HIP1RO75146 1068 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 BIRC2Q13490 618 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 RPS6KA2Q15349 733 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 RUFY4Q6ZNE9 571 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 PPP1R9AQ9ULJ8 1098 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 NDUFAB1O14561 156 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 SKOR1P84550 965 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 NONOQ15233 471 aaKnown RBP eCLIP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 PDZD8Q8NEN9 1154 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 MRPL46Q9H2W6 279 aaKnown RBP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 SPATS2Q86XZ4 545 aaKnown RBP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 UIMC1Q96RL1 719 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 LRRD1A4D1F6 860 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 ERMNQ8TAM6 284 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 JAKMIP1Q96N16 626 aaKnown RBP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 EFCC1Q9HA90 598 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 EPS15L1Q9UBC2 864 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 TEKT2Q9UIF3 430 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 CCT6AP40227 531 aaKnown RBP10.08□□□□□ -0.8
NIPBL-202ENST00000448238 VSIG1Q86XK7 387 aa10.08□□□□□ -0.8
NIPBL-202ENST00000448238 HSPA8P11142 646 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 UBA7P41226 1012 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 PLCB1Q9NQ66 1216 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 HNRNPCL2B2RXH8 293 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 E7EVH7 732 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 HNRNPCL1O60812 293 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 ANKRD20A3Q5VUR7 823 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 PHACTR2O75167 634 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 BMP15O95972 392 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 TUBB2AQ13885 445 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 SLMAPQ14BN4 828 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 PPP1R21Q6ZMI0 780 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 CACTINQ8WUQ7 758 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 TUBB2BQ9BVA1 445 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 EXOC1Q9NV70 894 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 RPAINQ86UA6 219 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 FAM8A1Q9UBU6 413 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 SMG6Q86US8 1419 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 N4BP3O15049 544 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 TBCAO75347 108 aaKnown RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 PALMDQ9NP74 551 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 MYH10P35580 1976 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 TTF1Q15361 905 aaPredicted RBP10.07□□□□□ -0.8
NIPBL-202ENST00000448238 CCDC93Q567U6 631 aa10.07□□□□□ -0.8
NIPBL-202ENST00000448238 LRP2BPQ9P2M1 347 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 EFCAB14O75071 495 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 CCDC102BQ68D86 513 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 FAM186BQ8IYM0 893 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 AFAP1L1Q8TED9 768 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 RNF41Q9H4P4 317 aaPredicted RBP10.06□□□□□ -0.8
NIPBL-202ENST00000448238 EEF2P13639 858 aaKnown RBP10.06□□□□□ -0.8
NIPBL-202ENST00000448238 PLCB4Q15147 1175 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 CCDC92Q53HC0 331 aaPredicted RBP10.06□□□□□ -0.8
NIPBL-202ENST00000448238 PPP4R1Q8TF05 950 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 MKNK2Q9HBH9 465 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 FMN1Q68DA7 1419 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 HEATR3Q7Z4Q2 680 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 CPLX3Q8WVH0 158 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 SLC8A3P57103 927 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 DEUP1Q05D60 604 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 AIDAQ96BJ3 306 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
NIPBL-202ENST00000448238 UTP11Q9Y3A2 253 aaKnown RBP10.06□□□□□ -0.8
NIPBL-202ENST00000448238 APAF1O14727 1248 aa10.05□□□□□ -0.8
NIPBL-202ENST00000448238 GFM2Q969S9 779 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms