RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 GABBR1Q9UBS5 961 aa8.35□□□□□ -1.07
MCF2-206ENST00000446225 KDM5DQ9BY66 1539 aa8.35□□□□□ -1.07
MCF2-206ENST00000446225 INHAP05111 366 aa8.35□□□□□ -1.07
MCF2-206ENST00000446225 HOXB1P14653 301 aaPredicted RBP8.35□□□□□ -1.07
MCF2-206ENST00000446225 MYO19Q96H55 970 aa8.35□□□□□ -1.07
MCF2-206ENST00000446225 C12orf49Q9H741 205 aa8.35□□□□□ -1.07
MCF2-206ENST00000446225 CDV3Q9UKY7 258 aaKnown RBP8.35□□□□□ -1.07
MCF2-206ENST00000446225 NFX1Q12986 1120 aaKnown RBP8.34□□□□□ -1.07
MCF2-206ENST00000446225 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
MCF2-206ENST00000446225 SLC9A9Q8IVB4 645 aa8.34□□□□□ -1.07
MCF2-206ENST00000446225 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
MCF2-206ENST00000446225 COPRSQ9NQ92 184 aa8.34□□□□□ -1.07
MCF2-206ENST00000446225 PRDM15P57071 1507 aaPredicted RBP8.33□□□□□ -1.08
MCF2-206ENST00000446225 C3P01024 1663 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 CHMP4BP1P59074 171 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 AMPD3Q01432 767 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ERMP1Q7Z2K6 904 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 SETD5Q9C0A6 1442 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 DNAJC25Q9H1X3 360 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 SNTG2Q9NY99 539 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 SCHIP1Q9P0W5 487 aaPredicted RBP8.33□□□□□ -1.08
MCF2-206ENST00000446225 DEPDC5O75140 1603 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 VWDEQ8N2E2 1590 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 CDC45O75419 566 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ZAP70P43403 619 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 HSPA2P54652 639 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ZNF511Q8NB15 262 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 OSBPL7Q9BZF2 842 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 ETNK1Q9HBU6 452 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 AXIN2Q9Y2T1 843 aa8.33□□□□□ -1.08
MCF2-206ENST00000446225 NPATQ14207 1427 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 FOXK2Q01167 660 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
MCF2-206ENST00000446225 C1QTNF2Q9BXJ5 285 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 PZPP20742 1482 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 FAM135AQ9P2D6 1515 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 TNRQ92752 1358 aa8.32□□□□□ -1.08
MCF2-206ENST00000446225 ARHGAP31Q2M1Z3 1444 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 ETFBP38117 255 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 ST13P50502 369 aaKnown RBP8.31□□□□□ -1.08
MCF2-206ENST00000446225 PPP4CP60510 307 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 PSMA6P60900 246 aaKnown RBP8.31□□□□□ -1.08
MCF2-206ENST00000446225 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 PI16Q6UXB8 463 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 NGLY1Q96IV0 654 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 SLC4A9Q96Q91 983 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 DEPDC7Q96QD5 511 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 OSBPL3Q9H4L5 887 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 FANCLQ9NW38 375 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 LMTK2Q8IWU2 1503 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 CEP152O94986 1710 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 BHMG1C9JSJ3 638 aaPredicted RBP8.31□□□□□ -1.08
MCF2-206ENST00000446225 ERVH48-1M5A8F1 160 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 CPNE3O75131 537 aaKnown RBP8.31□□□□□ -1.08
MCF2-206ENST00000446225 PCSK2P16519 638 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 NASPP49321 788 aaPredicted RBP8.31□□□□□ -1.08
MCF2-206ENST00000446225 RAB33AQ14088 237 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 RASA3Q14644 834 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 FMNL3Q8IVF7 1028 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 CCDC146Q8IYE0 955 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 SPON2Q9BUD6 331 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 TMX1Q9H3N1 280 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 UNC13BO14795 1591 aa8.31□□□□□ -1.08
MCF2-206ENST00000446225 RAB3GAP2Q9H2M9 1393 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
MCF2-206ENST00000446225 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
MCF2-206ENST00000446225 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 PMM1Q92871 262 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 KBTBD4Q9NVX7 518 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 FAM8A1Q9UBU6 413 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 CHMP3Q9Y3E7 222 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 GCC2Q8IWJ2 1684 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 ERVK-7P63135 1459 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 LMTK3Q96Q04 1460 aa8.3□□□□□ -1.08
MCF2-206ENST00000446225 CAMSAP1Q5T5Y3 1602 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 FAM221BA6H8Z2 402 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 A6NJY4 79 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 GIPC1O14908 333 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 KIAA0825Q8IV33 1275 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
MCF2-206ENST00000446225 SMC5Q8IY18 1101 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 TTC16Q8NEE8 873 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 MPHOSPH9Q99550 1183 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 ZC3H13Q5T200 1668 aaKnown RBP8.29□□□□□ -1.08
MCF2-206ENST00000446225 KLF4O43474 513 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 IDI1Q13907 227 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
MCF2-206ENST00000446225 PRR12Q9ULL5 1215 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 EFR3BQ9Y2G0 817 aa8.29□□□□□ -1.08
MCF2-206ENST00000446225 SETD1BQ9UPS6 1966 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms