RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SASH1O94885 1247 aa21.52■■□□□ 1.04
SGCE-206ENST00000445866 DALRD3Q5D0E6 543 aaKnown RBP21.52■■□□□ 1.04
SGCE-206ENST00000445866 CENPQQ7L2Z9 268 aaPredicted RBP21.52■■□□□ 1.04
SGCE-206ENST00000445866 SP8Q8IXZ3 490 aa21.52■■□□□ 1.04
SGCE-206ENST00000445866 SMC5Q8IY18 1101 aa21.52■■□□□ 1.04
SGCE-206ENST00000445866 HELBQ8NG08 1087 aaPredicted RBP21.52■■□□□ 1.04
SGCE-206ENST00000445866 ZBTB47Q9UFB7 747 aaPredicted RBP21.52■■□□□ 1.04
SGCE-206ENST00000445866 TFCP2Q12800 502 aa21.51■■□□□ 1.03
SGCE-206ENST00000445866 ATP6V0A2Q9Y487 856 aa21.51■■□□□ 1.03
SGCE-206ENST00000445866 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
SGCE-206ENST00000445866 CHRNDQ07001 517 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 RHPN1Q8TCX5 695 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 KIF1BPQ96EK5 621 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 LRRCC1Q9C099 1032 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 NRXN2Q9P2S2 1712 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 N4BP2Q86UW6 1770 aaPredicted RBP21.5■■□□□ 1.03
SGCE-206ENST00000445866 ANKRD2Q9GZV1 360 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 ANKIB1Q9P2G1 1089 aa21.5■■□□□ 1.03
SGCE-206ENST00000445866 C21orf2O43822 256 aa21.49■■□□□ 1.03
SGCE-206ENST00000445866 SMARCA5O60264 1052 aaPredicted RBP21.49■■□□□ 1.03
SGCE-206ENST00000445866 TAF5LO75529 589 aa21.49■■□□□ 1.03
SGCE-206ENST00000445866 KDM2BQ8NHM5 1336 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 OLFM4Q6UX06 510 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 SLC51AQ86UW1 340 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 C7orf43Q8WVR3 580 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 IL1RAPL2Q9NP60 686 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 NSFL1CQ9UNZ2 370 aaKnown RBP21.48■■□□□ 1.03
SGCE-206ENST00000445866 BCS1LQ9Y276 419 aa21.48■■□□□ 1.03
SGCE-206ENST00000445866 PDE8BO95263 885 aa21.47■■□□□ 1.03
SGCE-206ENST00000445866 GPSM2P81274 684 aa21.47■■□□□ 1.03
SGCE-206ENST00000445866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.47■■□□□ 1.03
SGCE-206ENST00000445866 NUCB1Q02818 461 aa21.46■■□□□ 1.03
SGCE-206ENST00000445866 CC2D2BQ6DHV5 1058 aa21.46■■□□□ 1.03
SGCE-206ENST00000445866 CLASRPQ8N2M8 674 aaKnown RBP21.46■■□□□ 1.03
SGCE-206ENST00000445866 AKAP2Q9Y2D5 859 aa21.46■■□□□ 1.03
SGCE-206ENST00000445866 SNAP23O00161 211 aa21.45■■□□□ 1.02
SGCE-206ENST00000445866 KCNJ4P48050 445 aa21.45■■□□□ 1.02
SGCE-206ENST00000445866 MPNDQ8N594 471 aa21.45■■□□□ 1.02
SGCE-206ENST00000445866 TNRC6CQ9HCJ0 1690 aaKnown RBP21.45■■□□□ 1.02
SGCE-206ENST00000445866 TIMM10P62072 90 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 CHD1LQ86WJ1 897 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 VGLL2Q8N8G2 317 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 NEUROD6Q96NK8 337 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 LNPKQ9C0E8 428 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
SGCE-206ENST00000445866 WTIPA6NIX2 430 aaPredicted RBP21.44■■□□□ 1.02
SGCE-206ENST00000445866 DPP8Q6V1X1 898 aaPredicted RBP21.44■■□□□ 1.02
SGCE-206ENST00000445866 GPR108Q9NPR9 543 aa21.44■■□□□ 1.02
SGCE-206ENST00000445866 XDHP47989 1333 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 C6orf229H3BNL8 230 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 PUM3Q15397 648 aaKnown RBP21.43■■□□□ 1.02
SGCE-206ENST00000445866 TNNI3KQ59H18 835 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 C16orf71Q8IYS4 520 aaPredicted RBP21.43■■□□□ 1.02
SGCE-206ENST00000445866 GGA1Q9UJY5 639 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 LEMD3Q9Y2U8 911 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 FPGT-TNNI3KV9GXZ4 949 aa21.43■■□□□ 1.02
SGCE-206ENST00000445866 ATP2B4P23634 1241 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 UBE4AQ14139 1066 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 ATP2B3Q16720 1220 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 SOGA3Q5TF21 947 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 AACSQ86V21 672 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 LPIN2Q92539 896 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 EAF2Q96CJ1 260 aaPredicted RBP21.42■■□□□ 1.02
SGCE-206ENST00000445866 CCDC8Q9H0W5 538 aaPredicted RBP21.42■■□□□ 1.02
SGCE-206ENST00000445866 PODXL2Q9NZ53 605 aa21.42■■□□□ 1.02
SGCE-206ENST00000445866 IFIT2P09913 472 aaKnown RBP21.41■■□□□ 1.02
SGCE-206ENST00000445866 GRIPAP1Q4V328 841 aa21.41■■□□□ 1.02
SGCE-206ENST00000445866 CCDC93Q567U6 631 aa21.41■■□□□ 1.02
SGCE-206ENST00000445866 PELP1Q8IZL8 1130 aaKnown RBP21.41■■□□□ 1.02
SGCE-206ENST00000445866 ZNF804BA4D1E1 1349 aa21.41■■□□□ 1.02
SGCE-206ENST00000445866 A0A1B0GUL7 405 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 UFL1O94874 794 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 IFIT1P09914 478 aaKnown RBP21.4■■□□□ 1.02
SGCE-206ENST00000445866 TBC1D16Q8TBP0 767 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 POLLQ9UGP5 575 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 SLC5A1P13866 664 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 FGFR2P21802 821 aa21.4■■□□□ 1.02
SGCE-206ENST00000445866 GORABQ5T7V8 394 aa21.39■■□□□ 1.01
SGCE-206ENST00000445866 COL4A1P02462 1669 aa21.38■■□□□ 1.01
SGCE-206ENST00000445866 ANKRD31Q8N7Z5 1873 aa21.38■■□□□ 1.01
SGCE-206ENST00000445866 XAGE2Q96GT9 111 aa21.37■■□□□ 1.01
SGCE-206ENST00000445866 GPR101Q96P66 508 aaPredicted RBP21.37■■□□□ 1.01
SGCE-206ENST00000445866 DBNDD2Q9BQY9 259 aa21.37■■□□□ 1.01
SGCE-206ENST00000445866 ZC3H12CQ9C0D7 883 aaKnown RBP21.37■■□□□ 1.01
SGCE-206ENST00000445866 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
SGCE-206ENST00000445866 ADORA1P30542 326 aa21.36■■□□□ 1.01
SGCE-206ENST00000445866 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
SGCE-206ENST00000445866 SUPT20HQ8NEM7 779 aa21.36■■□□□ 1.01
SGCE-206ENST00000445866 OTUD7AQ8TE49 926 aaPredicted RBP21.36■■□□□ 1.01
SGCE-206ENST00000445866 LAMB2P55268 1798 aa21.36■■□□□ 1.01
SGCE-206ENST00000445866 GPR162Q16538 588 aa21.35■■□□□ 1.01
SGCE-206ENST00000445866 WASHC4Q2M389 1173 aa21.35■■□□□ 1.01
SGCE-206ENST00000445866 CAVIN4Q5BKX8 364 aa21.35■■□□□ 1.01
SGCE-206ENST00000445866 EYA3Q99504 573 aa21.35■■□□□ 1.01
SGCE-206ENST00000445866 RTFDC1Q9BY42 306 aaPredicted RBP21.35■■□□□ 1.01
SGCE-206ENST00000445866 TLR7Q9NYK1 1049 aaKnown RBP21.35■■□□□ 1.01
SGCE-206ENST00000445866 DBNLQ9UJU6 430 aaKnown RBP21.35■■□□□ 1.01
SGCE-206ENST00000445866 BCAMP50895 628 aa21.34■■□□□ 1.01
SGCE-206ENST00000445866 VPS37DQ86XT2 251 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms