RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 LCE4AQ5TA78 99 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 ACAD11Q709F0 780 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 CLEC10AQ8IUN9 316 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 FAM83CQ9BQN1 747 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 KRTAP4-11Q9BYQ6 195 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 ANGEL1Q9UNK9 670 aaKnown RBP7.63□□□□□ -1.19
LINC01004-201ENST00000445184 PPME1Q9Y570 386 aa7.63□□□□□ -1.19
LINC01004-201ENST00000445184 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 WISP1O95388 367 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 PSAPP07602 524 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 USP17L2Q6R6M4 530 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
LINC01004-201ENST00000445184 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
LINC01004-201ENST00000445184 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
LINC01004-201ENST00000445184 KLK14Q9P0G3 267 aa7.61□□□□□ -1.19
LINC01004-201ENST00000445184 EGFRP00533 1210 aa7.6□□□□□ -1.19
LINC01004-201ENST00000445184 FAM20CQ8IXL6 584 aa7.6□□□□□ -1.19
LINC01004-201ENST00000445184 CLUAP1Q96AJ1 413 aa7.6□□□□□ -1.19
LINC01004-201ENST00000445184 ZNF594Q96JF6 807 aaPredicted RBP7.6□□□□□ -1.19
LINC01004-201ENST00000445184 MKRN1Q9UHC7 482 aaKnown RBP7.6□□□□□ -1.19
LINC01004-201ENST00000445184 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
LINC01004-201ENST00000445184 WDR64B1ANS9 1081 aa7.59□□□□□ -1.19
LINC01004-201ENST00000445184 LINC01387J3KSC0 135 aa7.59□□□□□ -1.19
LINC01004-201ENST00000445184 MICAL2O94851 1124 aa7.59□□□□□ -1.19
LINC01004-201ENST00000445184 RASA1P20936 1047 aa7.59□□□□□ -1.19
LINC01004-201ENST00000445184 HOXA10P31260 410 aaPredicted RBP7.59□□□□□ -1.19
LINC01004-201ENST00000445184 CBLL1Q75N03 491 aa7.59□□□□□ -1.19
LINC01004-201ENST00000445184 NSUN5Q96P11 429 aaKnown RBP7.59□□□□□ -1.19
LINC01004-201ENST00000445184 DKK1O94907 266 aa7.58□□□□□ -1.2
LINC01004-201ENST00000445184 JUNBP17275 347 aaPredicted RBP7.58□□□□□ -1.2
LINC01004-201ENST00000445184 SOX18P35713 384 aa7.58□□□□□ -1.2
LINC01004-201ENST00000445184 BEND4Q6ZU67 534 aa7.58□□□□□ -1.2
LINC01004-201ENST00000445184 KCNF1Q9H3M0 494 aa7.58□□□□□ -1.2
LINC01004-201ENST00000445184 PIM2Q9P1W9 311 aa7.58□□□□□ -1.2
LINC01004-201ENST00000445184 SART1O43290 800 aaKnown RBP7.57□□□□□ -1.2
LINC01004-201ENST00000445184 MMP20O60882 483 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 XYLBO75191 536 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 BMP3P12645 472 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 HOXD8P13378 290 aaPredicted RBP7.57□□□□□ -1.2
LINC01004-201ENST00000445184 DGKZQ13574 1117 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 DUOXA2Q1HG44 320 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 KIAA1211Q6ZU35 1233 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 GIMAP7Q8NHV1 300 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 KCNK4Q9NYG8 393 aa7.57□□□□□ -1.2
LINC01004-201ENST00000445184 RTCBQ9Y3I0 505 aaKnown RBP7.57□□□□□ -1.2
LINC01004-201ENST00000445184 ARID3CA6NKF2 412 aa7.56□□□□□ -1.2
LINC01004-201ENST00000445184 SEC13P55735 322 aa7.56□□□□□ -1.2
LINC01004-201ENST00000445184 FBLN7Q53RD9 439 aa7.56□□□□□ -1.2
LINC01004-201ENST00000445184 WWC1Q8IX03 1113 aa7.56□□□□□ -1.2
LINC01004-201ENST00000445184 FBXL18Q96ME1 805 aa7.56□□□□□ -1.2
LINC01004-201ENST00000445184 ITGB5P18084 799 aa7.55□□□□□ -1.2
LINC01004-201ENST00000445184 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.55□□□□□ -1.2
LINC01004-201ENST00000445184 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
LINC01004-201ENST00000445184 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
LINC01004-201ENST00000445184 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
LINC01004-201ENST00000445184 OPLAHO14841 1288 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 ATP9BO43861 1147 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 C11orf91Q3C1V1 193 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 PROSER2Q86WR7 435 aaPredicted RBP7.54□□□□□ -1.2
LINC01004-201ENST00000445184 TP53INP2Q8IXH6 220 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 CMTR1Q8N1G2 835 aaKnown RBP7.54□□□□□ -1.2
LINC01004-201ENST00000445184 KLHL23Q8NBE8 558 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 ATG3Q9NT62 314 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 USP20Q9Y2K6 914 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 HIF3AQ9Y2N7 669 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 COG6Q9Y2V7 657 aa7.54□□□□□ -1.2
LINC01004-201ENST00000445184 IGFBP4P22692 258 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 TRIM26Q12899 539 aaPredicted RBP7.53□□□□□ -1.2
LINC01004-201ENST00000445184 MSMPQ1L6U9 139 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 TXNDC11Q6PKC3 985 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 CCDC82Q8N4S0 544 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 POM121Q96HA1 1249 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
LINC01004-201ENST00000445184 TM4SF5O14894 197 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 FSCN2O14926 492 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 PRNPP04156 253 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 CDC27P30260 824 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 ANKRD34AQ69YU3 496 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 FAM117BQ6P1L5 589 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 VSIG10LQ86VR7 867 aa7.52□□□□□ -1.21
LINC01004-201ENST00000445184 FOSL1P15407 271 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 PREPP48147 710 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 RGL4Q8IZJ4 473 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 CARD10Q9BWT7 1032 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 LACRTQ9GZZ8 138 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 PODXL2Q9NZ53 605 aa7.51□□□□□ -1.21
LINC01004-201ENST00000445184 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
LINC01004-201ENST00000445184 CPSF6Q16630 551 aaKnown RBP eCLIP7.5□□□□□ -1.211e-7■■■■■ 32.5
LINC01004-201ENST00000445184 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
LINC01004-201ENST00000445184 QTRT2Q9H974 415 aaKnown RBP7.5□□□□□ -1.21
LINC01004-201ENST00000445184 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC01004-201ENST00000445184 CDC25BP30305 580 aa7.49□□□□□ -1.21
LINC01004-201ENST00000445184 CEP135Q66GS9 1140 aa7.49□□□□□ -1.21
LINC01004-201ENST00000445184 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
LINC01004-201ENST00000445184 FOXD4L4Q8WXT5 416 aaPredicted RBP7.49□□□□□ -1.21
LINC01004-201ENST00000445184 MYO19Q96H55 970 aa7.49□□□□□ -1.21
LINC01004-201ENST00000445184 KCNMB2Q9Y691 235 aa7.49□□□□□ -1.21
LINC01004-201ENST00000445184 DDX3YO15523 660 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms