RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
RBM39-216ENST00000444878 GREM2Q9H772 168 aa16.39■□□□□ 0.21
RBM39-216ENST00000444878 ANKRD18BA2A2Z9 1011 aa16.38■□□□□ 0.21
RBM39-216ENST00000444878 BRD1O95696 1058 aa16.38■□□□□ 0.21
RBM39-216ENST00000444878 TICAM2Q86XR7 235 aa16.38■□□□□ 0.21
RBM39-216ENST00000444878 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
RBM39-216ENST00000444878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
RBM39-216ENST00000444878 PDE8AO60658 829 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 CHGBP05060 677 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 CDK11BP21127 795 aaKnown RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 FOXD4L5Q5VV16 416 aaPredicted RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 FOXD4L4Q8WXT5 416 aaPredicted RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 SEC62Q99442 399 aaKnown RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 UBN2Q6ZU65 1347 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 FAM98CQ17RN3 349 aaKnown RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 CCDC129Q6ZRS4 1044 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 ZSCAN31Q96LW9 406 aaPredicted RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 DDX49Q9Y6V7 483 aaKnown RBP16.37■□□□□ 0.21
RBM39-216ENST00000444878 TCHHQ07283 1943 aa16.37■□□□□ 0.21
RBM39-216ENST00000444878 GOLGA6L3A6NEY3 463 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 METTL24Q5JXM2 366 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
RBM39-216ENST00000444878 C8orf37Q96NL8 207 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 ADORA1P30542 326 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 ITPK1Q13572 414 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 UBE2Q2Q8WVN8 375 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 SH2B1Q9NRF2 756 aaPredicted RBP16.36■□□□□ 0.21
RBM39-216ENST00000444878 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
RBM39-216ENST00000444878 RREB1Q92766 1687 aa16.36■□□□□ 0.21
RBM39-216ENST00000444878 CICQ96RK0 1608 aaPredicted RBP16.35■□□□□ 0.21
RBM39-216ENST00000444878 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
RBM39-216ENST00000444878 KRT32Q14532 448 aa16.35■□□□□ 0.21
RBM39-216ENST00000444878 MYH7P12883 1935 aa16.35■□□□□ 0.21
RBM39-216ENST00000444878 RIC1Q4ADV7 1423 aa16.35■□□□□ 0.21
RBM39-216ENST00000444878 KCNQ2O43526 872 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 ATP2B3Q16720 1220 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 KLHL40Q2TBA0 621 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 LMBRD1Q9NUN5 540 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 WDR33Q9C0J8 1336 aaKnown RBP16.34■□□□□ 0.21
RBM39-216ENST00000444878 LARGE1O95461 756 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 TAF6LQ9Y6J9 622 aa16.34■□□□□ 0.21
RBM39-216ENST00000444878 RPS6KB1P23443 525 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 ANKRD1Q15327 319 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 VPS72Q15906 364 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.21
RBM39-216ENST00000444878 ZMYM1Q5SVZ6 1142 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 SUSD4Q5VX71 490 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.21
RBM39-216ENST00000444878 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 AK7Q96M32 723 aa16.33■□□□□ 0.21
RBM39-216ENST00000444878 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.2
RBM39-216ENST00000444878 FSD2A1L4K1 749 aa16.33■□□□□ 0.2
RBM39-216ENST00000444878 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
RBM39-216ENST00000444878 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
RBM39-216ENST00000444878 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
RBM39-216ENST00000444878 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
RBM39-216ENST00000444878 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.2
RBM39-216ENST00000444878 BCL9LQ86UU0 1499 aa16.32■□□□□ 0.2
RBM39-216ENST00000444878 SLFNL1Q499Z3 407 aa16.32■□□□□ 0.2
RBM39-216ENST00000444878 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
RBM39-216ENST00000444878 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
RBM39-216ENST00000444878 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 ME3Q16798 604 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 NEK1Q96PY6 1258 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 CYP21A2P08686 494 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 HCLS1P14317 486 aaPredicted RBP16.31■□□□□ 0.2
RBM39-216ENST00000444878 CHAMP1Q96JM3 812 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
RBM39-216ENST00000444878 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
RBM39-216ENST00000444878 PDE8BO95263 885 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 NCLP19338 710 aaKnown RBP16.3■□□□□ 0.2
RBM39-216ENST00000444878 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
RBM39-216ENST00000444878 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 ISY1Q9ULR0 285 aaKnown RBP16.3■□□□□ 0.2
RBM39-216ENST00000444878 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
RBM39-216ENST00000444878 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 MAST3O60307 1309 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
RBM39-216ENST00000444878 SCARF1Q14162 830 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
RBM39-216ENST00000444878 STX6O43752 255 aa16.29■□□□□ 0.2
RBM39-216ENST00000444878 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms