RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 XDHP47989 1333 aa26.69■■□□□ 1.86
CDKN3-204ENST00000442975 GRM8O00222 908 aa26.69■■□□□ 1.86
CDKN3-204ENST00000442975 ITGA6P23229 1130 aa26.69■■□□□ 1.86
CDKN3-204ENST00000442975 IGHMBP2P38935 993 aaKnown RBP26.69■■□□□ 1.86
CDKN3-204ENST00000442975 PNMA8AQ86V59 439 aaPredicted RBP26.69■■□□□ 1.86
CDKN3-204ENST00000442975 C9orf78Q9NZ63 289 aaPredicted RBP26.69■■□□□ 1.86
CDKN3-204ENST00000442975 SCN4AP35499 1836 aa26.68■■□□□ 1.86
CDKN3-204ENST00000442975 YDJCA8MPS7 323 aa26.68■■□□□ 1.86
CDKN3-204ENST00000442975 GMPSP49915 693 aaPredicted RBP26.68■■□□□ 1.86
CDKN3-204ENST00000442975 DOK7Q18PE1 504 aa26.68■■□□□ 1.86
CDKN3-204ENST00000442975 ZC3H12CQ9C0D7 883 aaKnown RBP26.68■■□□□ 1.86
CDKN3-204ENST00000442975 LTBP1Q14766 1721 aa26.68■■□□□ 1.86
CDKN3-204ENST00000442975 PTPRCP08575 1304 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 ECE2O60344 883 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 ALDH1L1O75891 902 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 EPS15P42566 896 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 TNIP1Q15025 636 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 CACNA1FO60840 1977 aa26.67■■□□□ 1.86
CDKN3-204ENST00000442975 G3V3G9 751 aa26.66■■□□□ 1.86
CDKN3-204ENST00000442975 DCAF8Q5TAQ9 597 aa26.66■■□□□ 1.86
CDKN3-204ENST00000442975 TRMT2AQ8IZ69 625 aaKnown RBP26.66■■□□□ 1.86
CDKN3-204ENST00000442975 BSDC1Q9NW68 430 aaPredicted RBP26.66■■□□□ 1.86
CDKN3-204ENST00000442975 CSF1RP07333 972 aa26.65■■□□□ 1.86
CDKN3-204ENST00000442975 MPHOSPH8Q99549 860 aa26.65■■□□□ 1.86
CDKN3-204ENST00000442975 GPRC5DQ9NZD1 345 aa26.65■■□□□ 1.86
CDKN3-204ENST00000442975 MINPP1Q9UNW1 487 aa26.65■■□□□ 1.86
CDKN3-204ENST00000442975 ALDH1L2Q3SY69 923 aa26.64■■□□□ 1.86
CDKN3-204ENST00000442975 ANKRD18BA2A2Z9 1011 aa26.63■■□□□ 1.85
CDKN3-204ENST00000442975 ATP2B4P23634 1241 aa26.63■■□□□ 1.85
CDKN3-204ENST00000442975 FOXO4P98177 505 aa26.63■■□□□ 1.85
CDKN3-204ENST00000442975 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
CDKN3-204ENST00000442975 IFIT5Q13325 482 aaKnown RBP26.62■■□□□ 1.85
CDKN3-204ENST00000442975 MAP1SQ66K74 1059 aaPredicted RBP26.62■■□□□ 1.85
CDKN3-204ENST00000442975 LMBR1LQ6UX01 489 aa26.62■■□□□ 1.85
CDKN3-204ENST00000442975 PSMD14O00487 310 aa26.61■■□□□ 1.85
CDKN3-204ENST00000442975 CT47B1P0C2W7 299 aaPredicted RBP26.61■■□□□ 1.85
CDKN3-204ENST00000442975 EPHA10Q5JZY3 1008 aa26.61■■□□□ 1.85
CDKN3-204ENST00000442975 ADARB2Q9NS39 739 aaKnown RBP26.61■■□□□ 1.85
CDKN3-204ENST00000442975 ZBTB12Q9Y330 459 aaPredicted RBP26.61■■□□□ 1.85
CDKN3-204ENST00000442975 MYH3P11055 1940 aa26.61■■□□□ 1.85
CDKN3-204ENST00000442975 TAF7LQ5H9L4 462 aa26.6■■□□□ 1.85
CDKN3-204ENST00000442975 WTIPA6NIX2 430 aaPredicted RBP26.59■■□□□ 1.85
CDKN3-204ENST00000442975 CCT4P50991 539 aaKnown RBP26.59■■□□□ 1.85
CDKN3-204ENST00000442975 USP50Q70EL3 339 aaPredicted RBP26.59■■□□□ 1.85
CDKN3-204ENST00000442975 SUCLG2Q96I99 432 aa26.59■■□□□ 1.85
CDKN3-204ENST00000442975 KCNQ5Q9NR82 932 aa26.59■■□□□ 1.85
CDKN3-204ENST00000442975 NBPF7P0C2Y1 421 aaPredicted RBP26.58■■□□□ 1.85
CDKN3-204ENST00000442975 CCDC57Q2TAC2 916 aa26.58■■□□□ 1.85
CDKN3-204ENST00000442975 ANKRD2Q9GZV1 360 aa26.58■■□□□ 1.85
CDKN3-204ENST00000442975 ADAMTSL1Q8N6G6 1762 aa26.58■■□□□ 1.85
CDKN3-204ENST00000442975 MED23Q9ULK4 1368 aa26.58■■□□□ 1.84
CDKN3-204ENST00000442975 SHTN1A0MZ66 631 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 KCNJ4P48050 445 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 MICALL2Q8IY33 904 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 CNTROBQ8N137 903 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 DNAJC5GQ8N7S2 189 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 SPEF2Q9C093 1822 aa26.57■■□□□ 1.84
CDKN3-204ENST00000442975 CNOT7Q9UIV1 285 aaKnown RBP26.56■■□□□ 1.84
CDKN3-204ENST00000442975 PASKQ96RG2 1323 aa26.56■■□□□ 1.84
CDKN3-204ENST00000442975 CHRNDQ07001 517 aa26.55■■□□□ 1.84
CDKN3-204ENST00000442975 TRPM4Q8TD43 1214 aa26.55■■□□□ 1.84
CDKN3-204ENST00000442975 KLRG1Q96E93 195 aa26.55■■□□□ 1.84
CDKN3-204ENST00000442975 NOB1Q9ULX3 412 aaKnown RBP26.55■■□□□ 1.84
CDKN3-204ENST00000442975 H7C1D1 291 aa26.54■■□□□ 1.84
CDKN3-204ENST00000442975 ITGBL1O95965 494 aaPredicted RBP26.54■■□□□ 1.84
CDKN3-204ENST00000442975 ZNF594Q96JF6 807 aaPredicted RBP26.54■■□□□ 1.84
CDKN3-204ENST00000442975 LEMD3Q9Y2U8 911 aa26.54■■□□□ 1.84
CDKN3-204ENST00000442975 ZNF804BA4D1E1 1349 aa26.54■■□□□ 1.84
CDKN3-204ENST00000442975 RPS12P25398 132 aaKnown RBP26.53■■□□□ 1.84
CDKN3-204ENST00000442975 KLRK1P26718 216 aa26.53■■□□□ 1.84
CDKN3-204ENST00000442975 BICC1Q9H694 974 aaKnown RBP26.53■■□□□ 1.84
CDKN3-204ENST00000442975 CREBZFQ9NS37 354 aa26.53■■□□□ 1.84
CDKN3-204ENST00000442975 UTYO14607 1347 aa26.53■■□□□ 1.84
CDKN3-204ENST00000442975 RARSP54136 660 aaKnown RBP26.52■■□□□ 1.84
CDKN3-204ENST00000442975 HELBQ8NG08 1087 aaPredicted RBP26.52■■□□□ 1.84
CDKN3-204ENST00000442975 FBXW7Q969H0 707 aa26.52■■□□□ 1.84
CDKN3-204ENST00000442975 KAZALD1Q96I82 304 aa26.52■■□□□ 1.84
CDKN3-204ENST00000442975 CNNM1Q9NRU3 951 aa26.52■■□□□ 1.84
CDKN3-204ENST00000442975 TAF5LO75529 589 aa26.51■■□□□ 1.83
CDKN3-204ENST00000442975 LDHAL6AQ6ZMR3 332 aa26.51■■□□□ 1.83
CDKN3-204ENST00000442975 DPF2Q92785 391 aa26.51■■□□□ 1.83
CDKN3-204ENST00000442975 API5Q9BZZ5 524 aaKnown RBP26.51■■□□□ 1.83
CDKN3-204ENST00000442975 KIF16BQ96L93 1317 aa26.5■■□□□ 1.83
CDKN3-204ENST00000442975 VIL1P09327 827 aaKnown RBP26.5■■□□□ 1.83
CDKN3-204ENST00000442975 TBC1D10BQ4KMP7 808 aaPredicted RBP26.5■■□□□ 1.83
CDKN3-204ENST00000442975 PODNQ7Z5L7 613 aa26.5■■□□□ 1.83
CDKN3-204ENST00000442975 RSBN1LQ6PCB5 846 aaPredicted RBP26.49■■□□□ 1.83
CDKN3-204ENST00000442975 SAMD7Q7Z3H4 446 aa26.49■■□□□ 1.83
CDKN3-204ENST00000442975 TXNRD3Q86VQ6 643 aa26.49■■□□□ 1.83
CDKN3-204ENST00000442975 USP17L3A6NCW0 530 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 USP17L4A6NCW7 530 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 TMEM88BA6NKF7 163 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 SNAP23O00161 211 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 TRAF5O00463 557 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 PLIN1O60240 522 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 HIRAP54198 1017 aaPredicted RBP26.48■■□□□ 1.83
CDKN3-204ENST00000442975 RBM26Q5T8P6 1007 aaKnown RBP26.48■■□□□ 1.83
CDKN3-204ENST00000442975 USP17L1Q7RTZ2 530 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 ANKRD44Q8N8A2 993 aa26.48■■□□□ 1.83
CDKN3-204ENST00000442975 COA1Q9GZY4 146 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms