RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 FAM200AQ8TCP9 573 aa17.81■□□□□ 0.44
CDH23-207ENST00000442677 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
CDH23-207ENST00000442677 GBP7Q8N8V2 638 aaPredicted RBP17.81■□□□□ 0.44
CDH23-207ENST00000442677 WDR97A6NE52 1622 aa17.81■□□□□ 0.44
CDH23-207ENST00000442677 FCHSD2O94868 740 aa17.8■□□□□ 0.44
CDH23-207ENST00000442677 PYM1Q9BRP8 204 aaKnown RBP17.8■□□□□ 0.44
CDH23-207ENST00000442677 TBCAO75347 108 aaKnown RBP17.8■□□□□ 0.44
CDH23-207ENST00000442677 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
CDH23-207ENST00000442677 DNM1Q05193 864 aaKnown RBP17.8■□□□□ 0.44
CDH23-207ENST00000442677 FAM184BQ9ULE4 1060 aa17.8■□□□□ 0.44
CDH23-207ENST00000442677 SF3A3Q12874 501 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDH23-207ENST00000442677 SMAP1Q8IYB5 467 aaPredicted RBP17.8■□□□□ 0.44
CDH23-207ENST00000442677 ODF2LQ9ULJ1 636 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 KRT86O43790 486 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 UAP1Q16222 522 aaPredicted RBP17.79■□□□□ 0.44
CDH23-207ENST00000442677 AFAP1L1Q8TED9 768 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 KAT14Q9H8E8 782 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDH23-207ENST00000442677 SLC5A1P13866 664 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 PPP1R7Q15435 360 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 DPH6Q7L8W6 267 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 ATP2A1O14983 1001 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 IFIT5Q13325 482 aaKnown RBP17.79■□□□□ 0.44
CDH23-207ENST00000442677 EPSTI1Q96J88 318 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 IGHDP01880 384 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 UBXN1Q04323 297 aa17.79■□□□□ 0.44
CDH23-207ENST00000442677 SF3B2Q13435 895 aaKnown RBP17.79■□□□□ 0.44
CDH23-207ENST00000442677 TMEM87AQ8NBN3 555 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 MKRN1Q9UHC7 482 aaKnown RBP17.78■□□□□ 0.44
CDH23-207ENST00000442677 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDH23-207ENST00000442677 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 NSD3Q9BZ95 1437 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 KRT83P78385 493 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 LMNTD2Q8IXW0 634 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 TSPY2A6NKD2 308 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 TYRO3Q06418 890 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 IFNKQ9P0W0 207 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 GBP1P32455 592 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 VAV2P52735 878 aa17.78■□□□□ 0.44
CDH23-207ENST00000442677 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
CDH23-207ENST00000442677 STX17P56962 302 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 MRRFQ96E11 262 aaKnown RBP17.77■□□□□ 0.44
CDH23-207ENST00000442677 TCEANC2Q96MN5 208 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 ERCC5P28715 1186 aaPredicted RBP17.77■□□□□ 0.44
CDH23-207ENST00000442677 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 CCDC170Q8IYT3 715 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 DHX58Q96C10 678 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 ALG1Q9BT22 464 aa17.77■□□□□ 0.44
CDH23-207ENST00000442677 UTP14AQ9BVJ6 771 aaKnown RBP17.77■□□□□ 0.44
CDH23-207ENST00000442677 RPGRIP1LQ68CZ1 1315 aa17.77■□□□□ 0.43
CDH23-207ENST00000442677 PPP2R3AQ06190 1150 aa17.77■□□□□ 0.43
CDH23-207ENST00000442677 PRPHP41219 470 aa17.77■□□□□ 0.43
CDH23-207ENST00000442677 CACNA2D3Q8IZS8 1091 aa17.77■□□□□ 0.43
CDH23-207ENST00000442677 LUC7L2Q9Y383 392 aaKnown RBP17.77■□□□□ 0.43
CDH23-207ENST00000442677 NEDD9Q14511 834 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 ZNF692Q9BU19 519 aaPredicted RBP17.76■□□□□ 0.43
CDH23-207ENST00000442677 TXNDC16Q9P2K2 825 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 RTL1A6NKG5 1358 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 SH3BP5O60239 455 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 STARD3NLO95772 234 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 EVCP57679 992 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 PSMD6Q15008 389 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 TTC22Q5TAA0 569 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 B4GALNT4Q76KP1 1039 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 MRPS27Q92552 414 aaKnown RBP17.76■□□□□ 0.43
CDH23-207ENST00000442677 KLF18A0A0U1RQI7 1052 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 PROSER2Q86WR7 435 aaPredicted RBP17.76■□□□□ 0.43
CDH23-207ENST00000442677 GKAP1Q5VSY0 366 aaPredicted RBP17.76■□□□□ 0.43
CDH23-207ENST00000442677 CCDC42Q96M95 316 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 ARHGAP5Q13017 1502 aa17.76■□□□□ 0.43
CDH23-207ENST00000442677 INPP5BP32019 993 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 KCNG4Q8TDN1 519 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 ARHGEF2Q92974 986 aaKnown RBP17.75■□□□□ 0.43
CDH23-207ENST00000442677 LRRC27Q9C0I9 530 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 TRIM27P14373 513 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
CDH23-207ENST00000442677 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 LRRC45Q96CN5 670 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
CDH23-207ENST00000442677 ASIC1P78348 528 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 SWAP70Q9UH65 585 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 USHBP1Q8N6Y0 703 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 CASQ2O14958 399 aaPredicted RBP17.74■□□□□ 0.43
CDH23-207ENST00000442677 ZNF853P0CG23 659 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 ZNF131P52739 623 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 IFT74Q96LB3 600 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 TXNDC9O14530 226 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 RNASE9P60153 205 aaKnown RBP17.74■□□□□ 0.43
CDH23-207ENST00000442677 BRF1Q92994 677 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 MTRF1LQ9UGC7 380 aaKnown RBP17.74■□□□□ 0.43
CDH23-207ENST00000442677 NDUFAB1O14561 156 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 ARFGAP2Q8N6H7 521 aa17.74■□□□□ 0.43
CDH23-207ENST00000442677 BMP2KLQ5H9B9 411 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 CCDC110Q8TBZ0 833 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 PSMA7O14818 248 aa17.73■□□□□ 0.43
CDH23-207ENST00000442677 AKNAD1Q5T1N1 836 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms