RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
MCF2L-218ENST00000442625 ZNF771Q7L3S4 317 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-218ENST00000442625 SCAND2PQ9GZW5 306 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-218ENST00000442625 ELP1O95163 1332 aa16.62■□□□□ 0.25
MCF2L-218ENST00000442625 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
MCF2L-218ENST00000442625 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
MCF2L-218ENST00000442625 NPHP4O75161 1426 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-218ENST00000442625 CLGNO14967 610 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
MCF2L-218ENST00000442625 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 SLFNL1Q499Z3 407 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 SEC62Q99442 399 aaKnown RBP16.61■□□□□ 0.25
MCF2L-218ENST00000442625 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
MCF2L-218ENST00000442625 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
MCF2L-218ENST00000442625 HIP1O00291 1037 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 PDCP20941 246 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-218ENST00000442625 NFAT5O94916 1531 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 GUCY1B3Q02153 619 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 PDIA6Q15084 440 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 FAM43BQ6ZT52 329 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-218ENST00000442625 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 ST7Q9NRC1 585 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 KIF13AQ9H1H9 1805 aa16.6■□□□□ 0.25
MCF2L-218ENST00000442625 H3BQV1 296 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 LRRC8AQ8IWT6 810 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 GOLPH3LQ9H4A5 285 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 DDX58O95786 925 aaKnown RBP16.59■□□□□ 0.25
MCF2L-218ENST00000442625 GCP02774 474 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 MYD88Q99836 296 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 COL15A1P39059 1388 aa16.59■□□□□ 0.25
MCF2L-218ENST00000442625 MED23Q9ULK4 1368 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 TAF5LO75529 589 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 RESTQ13127 1097 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 IQCB1Q15051 598 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 RBM43Q6ZSC3 357 aaKnown RBP16.58■□□□□ 0.25
MCF2L-218ENST00000442625 Q6ZUG5 572 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 KCNH5Q8NCM2 988 aa16.58■□□□□ 0.25
MCF2L-218ENST00000442625 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.25
MCF2L-218ENST00000442625 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.25
MCF2L-218ENST00000442625 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
MCF2L-218ENST00000442625 SKILP12757 684 aa16.58■□□□□ 0.24
MCF2L-218ENST00000442625 ANKRD1Q15327 319 aa16.58■□□□□ 0.24
MCF2L-218ENST00000442625 KIF20AO95235 890 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 KMT5BQ4FZB7 885 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
MCF2L-218ENST00000442625 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 ZBTB22O15209 634 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 ORAI2Q96SN7 254 aa16.57■□□□□ 0.24
MCF2L-218ENST00000442625 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
MCF2L-218ENST00000442625 A0A0G2JLW4 131 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 TFCP2Q12800 502 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 ELF2Q15723 593 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 COPS6Q7L5N1 327 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 CCAR1Q8IX12 1150 aaKnown RBP16.56■□□□□ 0.24
MCF2L-218ENST00000442625 FEZ1Q99689 392 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 DDX41Q9UJV9 622 aaKnown RBP16.56■□□□□ 0.24
MCF2L-218ENST00000442625 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 UTYO14607 1347 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 CCDC69A6NI79 296 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
MCF2L-218ENST00000442625 KIF18AQ8NI77 898 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 GTF3C6Q969F1 213 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
MCF2L-218ENST00000442625 GCKRQ14397 625 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 LRRN4CLQ8ND94 238 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 SCRN1Q12765 414 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 PTPN14Q15678 1187 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
MCF2L-218ENST00000442625 NEK1Q96PY6 1258 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
MCF2L-218ENST00000442625 PAXBP1Q9Y5B6 917 aa16.55■□□□□ 0.24
MCF2L-218ENST00000442625 CHST3Q7LGC8 479 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
MCF2L-218ENST00000442625 BECN2A8MW95 431 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 ATP5J2-PTCD1G3V325 749 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 PTCD1O75127 700 aaKnown RBP16.54■□□□□ 0.24
MCF2L-218ENST00000442625 CYP21A2P08686 494 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 FBXO38Q6PIJ6 1188 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 USP28Q96RU2 1077 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 DBNDD2Q9BQY9 259 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
MCF2L-218ENST00000442625 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
MCF2L-218ENST00000442625 MMP14P50281 582 aa16.53■□□□□ 0.24
MCF2L-218ENST00000442625 CCZ1BP86790 482 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms