RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
TRIM13-205ENST00000442421 C2orf69Q8N8R5 385 aa16.71■□□□□ 0.27
TRIM13-205ENST00000442421 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
TRIM13-205ENST00000442421 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-205ENST00000442421 ZNF157P51786 506 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-205ENST00000442421 KIF23Q02241 960 aaPredicted RBP16.7■□□□□ 0.26
TRIM13-205ENST00000442421 TBC1D16Q8TBP0 767 aa16.7■□□□□ 0.26
TRIM13-205ENST00000442421 EYA3Q99504 573 aa16.7■□□□□ 0.26
TRIM13-205ENST00000442421 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
TRIM13-205ENST00000442421 KIF4BQ2VIQ3 1234 aa16.69■□□□□ 0.26
TRIM13-205ENST00000442421 GGA3Q9NZ52 723 aa16.69■□□□□ 0.26
TRIM13-205ENST00000442421 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
TRIM13-205ENST00000442421 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
TRIM13-205ENST00000442421 TRPA1O75762 1119 aa16.68■□□□□ 0.26
TRIM13-205ENST00000442421 CCDC102AQ96A19 550 aa16.68■□□□□ 0.26
TRIM13-205ENST00000442421 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
TRIM13-205ENST00000442421 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
TRIM13-205ENST00000442421 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
TRIM13-205ENST00000442421 SULF1Q8IWU6 871 aa16.67■□□□□ 0.26
TRIM13-205ENST00000442421 SEC31BQ9NQW1 1179 aa16.67■□□□□ 0.26
TRIM13-205ENST00000442421 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
TRIM13-205ENST00000442421 UFL1O94874 794 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 SLC10A3P09131 477 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 VIL1P09327 827 aaKnown RBP16.66■□□□□ 0.26
TRIM13-205ENST00000442421 HOXB7P09629 217 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 SOX10P56693 466 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 RALBP1Q15311 655 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 CDCA5Q96FF9 252 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 ZC3H12CQ9C0D7 883 aaKnown RBP16.66■□□□□ 0.26
TRIM13-205ENST00000442421 HYPKQ9NX55 129 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 MYH3P11055 1940 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 PAPPA2Q9BXP8 1791 aa16.66■□□□□ 0.26
TRIM13-205ENST00000442421 G3V3G9 751 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 PODXL2Q9NZ53 605 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 ANKIB1Q9P2G1 1089 aa16.65■□□□□ 0.26
TRIM13-205ENST00000442421 ZNF646O15015 1829 aaPredicted RBP16.65■□□□□ 0.26
TRIM13-205ENST00000442421 TRIM28Q13263 835 aaKnown RBP16.64■□□□□ 0.25
TRIM13-205ENST00000442421 ANGEL2Q5VTE6 544 aaKnown RBP16.64■□□□□ 0.25
TRIM13-205ENST00000442421 GGA1Q9UJY5 639 aa16.64■□□□□ 0.25
TRIM13-205ENST00000442421 SCARF1Q14162 830 aa16.63■□□□□ 0.25
TRIM13-205ENST00000442421 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
TRIM13-205ENST00000442421 ZBTB38Q8NAP3 1195 aaPredicted RBP16.63■□□□□ 0.25
TRIM13-205ENST00000442421 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
TRIM13-205ENST00000442421 ZNF609O15014 1411 aa16.62■□□□□ 0.25
TRIM13-205ENST00000442421 ZNF280AP59817 542 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
TRIM13-205ENST00000442421 RSBN1LQ6PCB5 846 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 RASAL3Q86YV0 1011 aa16.62■□□□□ 0.25
TRIM13-205ENST00000442421 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 MYD88Q99836 296 aa16.62■□□□□ 0.25
TRIM13-205ENST00000442421 PHAXQ9H814 394 aaKnown RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 MBIPQ9NS73 344 aa16.62■□□□□ 0.25
TRIM13-205ENST00000442421 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
TRIM13-205ENST00000442421 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRIM13-205ENST00000442421 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
TRIM13-205ENST00000442421 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
TRIM13-205ENST00000442421 MOB2Q70IA6 237 aa16.6■□□□□ 0.25
TRIM13-205ENST00000442421 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
TRIM13-205ENST00000442421 ELL2O00472 640 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-205ENST00000442421 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
TRIM13-205ENST00000442421 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
TRIM13-205ENST00000442421 GMLQ99445 158 aa16.59■□□□□ 0.25
TRIM13-205ENST00000442421 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
TRIM13-205ENST00000442421 XDHP47989 1333 aa16.59■□□□□ 0.25
TRIM13-205ENST00000442421 WTIPA6NIX2 430 aaPredicted RBP16.58■□□□□ 0.24
TRIM13-205ENST00000442421 PDE8AO60658 829 aa16.58■□□□□ 0.24
TRIM13-205ENST00000442421 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
TRIM13-205ENST00000442421 HSP90B1P14625 803 aaKnown RBP16.58■□□□□ 0.24
TRIM13-205ENST00000442421 PITPNM2Q9BZ72 1349 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 USP17L3A6NCW0 530 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 USP17L4A6NCW7 530 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 FKBP1BP68106 108 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 USP17L1Q7RTZ2 530 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 ANKRD18AQ8IVF6 992 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
TRIM13-205ENST00000442421 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
TRIM13-205ENST00000442421 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
TRIM13-205ENST00000442421 UBE2Q2LH0YL09 131 aa16.56■□□□□ 0.24
TRIM13-205ENST00000442421 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
TRIM13-205ENST00000442421 TBC1D8O95759 1140 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 NBPF9Q3BBW0 867 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 MXD3Q9BW11 206 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 HPS5Q9UPZ3 1129 aa16.55■□□□□ 0.24
TRIM13-205ENST00000442421 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
TRIM13-205ENST00000442421 TTLL12Q14166 644 aaPredicted RBP16.54■□□□□ 0.24
TRIM13-205ENST00000442421 METTL22Q9BUU2 404 aaPredicted RBP16.54■□□□□ 0.24
TRIM13-205ENST00000442421 PCDH10Q9P2E7 1040 aa16.54■□□□□ 0.24
TRIM13-205ENST00000442421 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
TRIM13-205ENST00000442421 CTSWP56202 376 aa16.53■□□□□ 0.24
TRIM13-205ENST00000442421 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
TRIM13-205ENST00000442421 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
TRIM13-205ENST00000442421 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms