RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SLFN5Q08AF3 891 aa24.11■■□□□ 1.45
HMGB3P22-201ENST00000442010 CDC5LQ99459 802 aaKnown RBP24.11■■□□□ 1.45
HMGB3P22-201ENST00000442010 EYA3Q99504 573 aa24.11■■□□□ 1.45
HMGB3P22-201ENST00000442010 DBNDD1Q9H9R9 158 aa24.11■■□□□ 1.45
HMGB3P22-201ENST00000442010 CLEC11AQ9Y240 323 aa24.11■■□□□ 1.45
HMGB3P22-201ENST00000442010 TNIP1Q15025 636 aa24.1■■□□□ 1.45
HMGB3P22-201ENST00000442010 MAP1SQ66K74 1059 aaPredicted RBP24.1■■□□□ 1.45
HMGB3P22-201ENST00000442010 USP50Q70EL3 339 aaPredicted RBP24.1■■□□□ 1.45
HMGB3P22-201ENST00000442010 CREBZFQ9NS37 354 aa24.1■■□□□ 1.45
HMGB3P22-201ENST00000442010 BSDC1Q9NW68 430 aaPredicted RBP24.1■■□□□ 1.45
HMGB3P22-201ENST00000442010 PCNTO95613 3336 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 TRPM7Q96QT4 1865 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 CNTROBQ8N137 903 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 ANKIB1Q9P2G1 1089 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 GGA1Q9UJY5 639 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 XDHP47989 1333 aa24.09■■□□□ 1.45
HMGB3P22-201ENST00000442010 ECE2O60344 883 aa24.08■■□□□ 1.45
HMGB3P22-201ENST00000442010 UFL1O94874 794 aa24.08■■□□□ 1.45
HMGB3P22-201ENST00000442010 ADARB2Q9NS39 739 aaKnown RBP24.08■■□□□ 1.45
HMGB3P22-201ENST00000442010 A0A1B0GUL6 1792 aa24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 PSMD14O00487 310 aa24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 DOK7Q18PE1 504 aa24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 TRMT2AQ8IZ69 625 aaKnown RBP24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 KCNQ5Q9NR82 932 aa24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 MINPP1Q9UNW1 487 aa24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 POLR2AP24928 1970 aaKnown RBP24.07■■□□□ 1.44
HMGB3P22-201ENST00000442010 FAM161AQ3B820 660 aa24.06■■□□□ 1.44
HMGB3P22-201ENST00000442010 MRPL50Q8N5N7 158 aaKnown RBP24.06■■□□□ 1.44
HMGB3P22-201ENST00000442010 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
HMGB3P22-201ENST00000442010 ZC3H12CQ9C0D7 883 aaKnown RBP24.06■■□□□ 1.44
HMGB3P22-201ENST00000442010 ZNF646O15015 1829 aaPredicted RBP24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 WTIPA6NIX2 430 aaPredicted RBP24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 ITGA6P23229 1130 aa24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 ATP2B4P23634 1241 aa24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 FOXO4P98177 505 aa24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 BCL2L13Q9BXK5 485 aa24.05■■□□□ 1.44
HMGB3P22-201ENST00000442010 SHTN1A0MZ66 631 aa24.04■■□□□ 1.44
HMGB3P22-201ENST00000442010 DPF2Q92785 391 aa24.04■■□□□ 1.44
HMGB3P22-201ENST00000442010 CNOT7Q9UIV1 285 aaKnown RBP24.04■■□□□ 1.44
HMGB3P22-201ENST00000442010 ZBTB12Q9Y330 459 aaPredicted RBP24.04■■□□□ 1.44
HMGB3P22-201ENST00000442010 ALDH1L1O75891 902 aa24.03■■□□□ 1.44
HMGB3P22-201ENST00000442010 HIRAP54198 1017 aaPredicted RBP24.03■■□□□ 1.44
HMGB3P22-201ENST00000442010 PGAP2Q9UHJ9 254 aa24.03■■□□□ 1.44
HMGB3P22-201ENST00000442010 TMEM88BA6NKF7 163 aa24.02■■□□□ 1.44
HMGB3P22-201ENST00000442010 GRM8O00222 908 aa24.02■■□□□ 1.44
HMGB3P22-201ENST00000442010 IGHMBP2P38935 993 aaKnown RBP24.02■■□□□ 1.44
HMGB3P22-201ENST00000442010 TRPM4Q8TD43 1214 aa24.02■■□□□ 1.44
HMGB3P22-201ENST00000442010 VIL1P09327 827 aaKnown RBP24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 EPHA10Q5JZY3 1008 aa24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 MICALL2Q8IY33 904 aa24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 SSH1Q8WYL5 1049 aa24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 MED23Q9ULK4 1368 aa24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 ZNF609O15014 1411 aa24.01■■□□□ 1.43
HMGB3P22-201ENST00000442010 RPS12P25398 132 aaKnown RBP24■■□□□ 1.43
HMGB3P22-201ENST00000442010 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
HMGB3P22-201ENST00000442010 SLC4A10Q6U841 1118 aa24■■□□□ 1.43
HMGB3P22-201ENST00000442010 SRCIN1Q9C0H9 1055 aa24■■□□□ 1.43
HMGB3P22-201ENST00000442010 CNTNAP1P78357 1384 aa24■■□□□ 1.43
HMGB3P22-201ENST00000442010 H7C1D1 291 aa23.99■■□□□ 1.43
HMGB3P22-201ENST00000442010 FMR1Q06787 632 aaKnown RBP eCLIP23.99■■□□□ 1.43
HMGB3P22-201ENST00000442010 ZC3H15Q8WU90 426 aaKnown RBP23.99■■□□□ 1.43
HMGB3P22-201ENST00000442010 PTPRCP08575 1304 aa23.99■■□□□ 1.43
HMGB3P22-201ENST00000442010 ANKRD18BA2A2Z9 1011 aa23.98■■□□□ 1.43
HMGB3P22-201ENST00000442010 MKRN1Q9UHC7 482 aaKnown RBP23.98■■□□□ 1.43
HMGB3P22-201ENST00000442010 LEMD3Q9Y2U8 911 aa23.98■■□□□ 1.43
HMGB3P22-201ENST00000442010 UTYO14607 1347 aa23.98■■□□□ 1.43
HMGB3P22-201ENST00000442010 ALDH1L2Q3SY69 923 aa23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 LMBR1LQ6UX01 489 aa23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 PODNQ7Z5L7 613 aa23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 KAZALD1Q96I82 304 aa23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 MPHOSPH8Q99549 860 aa23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 C9orf78Q9NZ63 289 aaPredicted RBP23.97■■□□□ 1.43
HMGB3P22-201ENST00000442010 G3V3G9 751 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 TRAF5O00463 557 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 EGFRP00533 1210 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 DCAF8Q5TAQ9 597 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 SAMD7Q7Z3H4 446 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 TXNRD3Q86VQ6 643 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 ANKRD2Q9GZV1 360 aa23.96■■□□□ 1.43
HMGB3P22-201ENST00000442010 NBPF7P0C2Y1 421 aaPredicted RBP23.95■■□□□ 1.42
HMGB3P22-201ENST00000442010 CHRNDQ07001 517 aa23.95■■□□□ 1.42
HMGB3P22-201ENST00000442010 IFIT5Q13325 482 aaKnown RBP23.95■■□□□ 1.42
HMGB3P22-201ENST00000442010 ZNF804BA4D1E1 1349 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 RASSF10A6NK89 507 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 CST9Q5W186 159 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 RSBN1LQ6PCB5 846 aaPredicted RBP23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 AGBL3Q8NEM8 1001 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 SUCLG2Q96I99 432 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 GMLQ99445 158 aa23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 GLIS2Q9BZE0 524 aaPredicted RBP23.94■■□□□ 1.42
HMGB3P22-201ENST00000442010 IRS2Q9Y4H2 1338 aa23.93■■□□□ 1.42
HMGB3P22-201ENST00000442010 CT47B1P0C2W7 299 aaPredicted RBP23.93■■□□□ 1.42
HMGB3P22-201ENST00000442010 KLRK1P26718 216 aa23.93■■□□□ 1.42
HMGB3P22-201ENST00000442010 USP17L3A6NCW0 530 aa23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 USP17L4A6NCW7 530 aa23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 TBC1D10BQ4KMP7 808 aaPredicted RBP23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 USP17L1Q7RTZ2 530 aa23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 ZNF594Q96JF6 807 aaPredicted RBP23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 COA1Q9GZY4 146 aa23.92■■□□□ 1.42
HMGB3P22-201ENST00000442010 CHMP3Q9Y3E7 222 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms