RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 RTFDC1Q9BY42 306 aaPredicted RBP10.45□□□□□ -0.74
TIMP1-203ENST00000441738 TAOK3Q9H2K8 898 aa10.45□□□□□ -0.74
TIMP1-203ENST00000441738 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
TIMP1-203ENST00000441738 ZNF541Q9H0D2 1346 aa10.44□□□□□ -0.74
TIMP1-203ENST00000441738 GPSM2P81274 684 aa10.44□□□□□ -0.74
TIMP1-203ENST00000441738 INTS3Q68E01 1043 aaKnown RBP10.44□□□□□ -0.74
TIMP1-203ENST00000441738 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
TIMP1-203ENST00000441738 DDX46Q7L014 1031 aaKnown RBP10.44□□□□□ -0.74
TIMP1-203ENST00000441738 SP8Q8IXZ3 490 aa10.44□□□□□ -0.74
TIMP1-203ENST00000441738 GPR101Q96P66 508 aaPredicted RBP10.44□□□□□ -0.74
TIMP1-203ENST00000441738 MEIS3Q99687 375 aa10.44□□□□□ -0.74
TIMP1-203ENST00000441738 BBOX1O75936 387 aa10.43□□□□□ -0.74
TIMP1-203ENST00000441738 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
TIMP1-203ENST00000441738 MAP2K1Q02750 393 aaPredicted RBP10.43□□□□□ -0.74
TIMP1-203ENST00000441738 CCDC152Q4G0S7 254 aa10.43□□□□□ -0.74
TIMP1-203ENST00000441738 CHADLQ6NUI6 762 aa10.43□□□□□ -0.74
TIMP1-203ENST00000441738 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
TIMP1-203ENST00000441738 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
TIMP1-203ENST00000441738 POLLQ9UGP5 575 aa10.43□□□□□ -0.74
TIMP1-203ENST00000441738 POTECB2RU33 542 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 ITGA6P23229 1130 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 IARSP41252 1262 aaKnown RBP10.42□□□□□ -0.74
TIMP1-203ENST00000441738 RFX5P48382 616 aaPredicted RBP10.42□□□□□ -0.74
TIMP1-203ENST00000441738 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 PRPF38BQ5VTL8 546 aaKnown RBP10.42□□□□□ -0.74
TIMP1-203ENST00000441738 LMBR1LQ6UX01 489 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 TMEM57Q8N5G2 664 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
TIMP1-203ENST00000441738 ZNF594Q96JF6 807 aaPredicted RBP10.42□□□□□ -0.74
TIMP1-203ENST00000441738 KLRK1P26718 216 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 CCT4P50991 539 aaKnown RBP10.41□□□□□ -0.74
TIMP1-203ENST00000441738 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 RTKN2Q8IZC4 609 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-203ENST00000441738 YTHDC1Q96MU7 727 aaKnown RBP10.41□□□□□ -0.74
TIMP1-203ENST00000441738 PODXL2Q9NZ53 605 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 C9orf78Q9NZ63 289 aaPredicted RBP10.41□□□□□ -0.74
TIMP1-203ENST00000441738 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 ECM29Q5VYK3 1845 aa10.41□□□□□ -0.74
TIMP1-203ENST00000441738 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
TIMP1-203ENST00000441738 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.74
TIMP1-203ENST00000441738 YDJCA8MPS7 323 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 FZD9O00144 591 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 SNAP23O00161 211 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 AOC3Q16853 763 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 C20orf194Q5TEA3 1177 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 ZKSCAN2Q63HK3 967 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 KLHDC4Q8TBB5 520 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 TBC1D16Q8TBP0 767 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 PUS3Q9BZE2 481 aaKnown RBP10.4□□□□□ -0.74
TIMP1-203ENST00000441738 BSDC1Q9NW68 430 aaPredicted RBP10.4□□□□□ -0.74
TIMP1-203ENST00000441738 PDE4DIPQ5VU43 2346 aa10.4□□□□□ -0.74
TIMP1-203ENST00000441738 TMEM88BA6NKF7 163 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 PLIN1O60240 522 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 DPP8Q6V1X1 898 aaPredicted RBP10.39□□□□□ -0.75
TIMP1-203ENST00000441738 TXNRD3Q86VQ6 643 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 ANKRD18AQ8IVF6 992 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 MPNDQ8N594 471 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 PANK1Q8TE04 598 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 LRRFIP2Q9Y608 721 aaKnown RBP10.39□□□□□ -0.75
TIMP1-203ENST00000441738 AKAP11Q9UKA4 1901 aa10.39□□□□□ -0.75
TIMP1-203ENST00000441738 PASKQ96RG2 1323 aa10.38□□□□□ -0.75
TIMP1-203ENST00000441738 HSP90B1P14625 803 aaKnown RBP10.38□□□□□ -0.75
TIMP1-203ENST00000441738 VGLL2Q8N8G2 317 aa10.38□□□□□ -0.75
TIMP1-203ENST00000441738 CDC5LQ99459 802 aaKnown RBP10.38□□□□□ -0.75
TIMP1-203ENST00000441738 BEGAINQ9BUH8 593 aa10.38□□□□□ -0.75
TIMP1-203ENST00000441738 KCNQ5Q9NR82 932 aa10.38□□□□□ -0.75
TIMP1-203ENST00000441738 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
TIMP1-203ENST00000441738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.38□□□□□ -0.75
TIMP1-203ENST00000441738 MED23Q9ULK4 1368 aa10.38□□□□□ -0.75
TIMP1-203ENST00000441738 XDHP47989 1333 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 ZNF609O15014 1411 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 DDNO94850 711 aaPredicted RBP10.37□□□□□ -0.75
TIMP1-203ENST00000441738 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 POTEJP0CG39 1038 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 PTPN12Q05209 780 aaKnown RBP10.37□□□□□ -0.75
TIMP1-203ENST00000441738 CHRNDQ07001 517 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 MTX1Q13505 466 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 DEFB115Q30KQ5 88 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 GRIPAP1Q4V328 841 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 LRRC24Q50LG9 513 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 ATG9AQ7Z3C6 839 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 MCOLN1Q9GZU1 580 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 RIPOR2Q9Y4F9 1068 aa10.37□□□□□ -0.75
TIMP1-203ENST00000441738 COL1A1P02452 1464 aaPredicted RBP10.36□□□□□ -0.75
TIMP1-203ENST00000441738 WDR33Q9C0J8 1336 aaKnown RBP10.36□□□□□ -0.75
TIMP1-203ENST00000441738 PNMA6EA0A0J9YXQ4 647 aa10.36□□□□□ -0.75
TIMP1-203ENST00000441738 ANKRD18BA2A2Z9 1011 aa10.36□□□□□ -0.75
TIMP1-203ENST00000441738 RASSF10A6NK89 507 aa10.36□□□□□ -0.75
TIMP1-203ENST00000441738 ZBTB7BO15156 539 aaPredicted RBP10.36□□□□□ -0.75
TIMP1-203ENST00000441738 IPO8O15397 1037 aaKnown RBP10.36□□□□□ -0.75
TIMP1-203ENST00000441738 TAF5LO75529 589 aa10.36□□□□□ -0.75
TIMP1-203ENST00000441738 UFL1O94874 794 aa10.36□□□□□ -0.75
TIMP1-203ENST00000441738 UBTFL1P0CB47 393 aaPredicted RBP10.36□□□□□ -0.75
TIMP1-203ENST00000441738 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms