RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
RFTN1-204ENST00000441460 UFL1O94874 794 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-204ENST00000441460 ITGA6P23229 1130 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-204ENST00000441460 FOXO4P98177 505 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 PNMA8AQ86V59 439 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-204ENST00000441460 KCNQ5Q9NR82 932 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
RFTN1-204ENST00000441460 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
RFTN1-204ENST00000441460 ECE2O60344 883 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
RFTN1-204ENST00000441460 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 EYA3Q99504 573 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 BCL2L13Q9BXK5 485 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 CLEC11AQ9Y240 323 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 XDHP47989 1333 aa17.16■□□□□ 0.34
RFTN1-204ENST00000441460 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
RFTN1-204ENST00000441460 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
RFTN1-204ENST00000441460 GRM8O00222 908 aa17.15■□□□□ 0.34
RFTN1-204ENST00000441460 ALDH1L1O75891 902 aa17.15■□□□□ 0.34
RFTN1-204ENST00000441460 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
RFTN1-204ENST00000441460 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
RFTN1-204ENST00000441460 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
RFTN1-204ENST00000441460 PSMD14O00487 310 aa17.14■□□□□ 0.33
RFTN1-204ENST00000441460 TNIP1Q15025 636 aa17.14■□□□□ 0.33
RFTN1-204ENST00000441460 KLRG1Q96E93 195 aa17.14■□□□□ 0.33
RFTN1-204ENST00000441460 ZC3H12CQ9C0D7 883 aaKnown RBP17.14■□□□□ 0.33
RFTN1-204ENST00000441460 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
RFTN1-204ENST00000441460 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
RFTN1-204ENST00000441460 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
RFTN1-204ENST00000441460 CNTROBQ8N137 903 aa17.13■□□□□ 0.33
RFTN1-204ENST00000441460 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
RFTN1-204ENST00000441460 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
RFTN1-204ENST00000441460 PTPRCP08575 1304 aa17.13■□□□□ 0.33
RFTN1-204ENST00000441460 NBPF7P0C2Y1 421 aaPredicted RBP17.12■□□□□ 0.33
RFTN1-204ENST00000441460 IGHMBP2P38935 993 aaKnown RBP17.12■□□□□ 0.33
RFTN1-204ENST00000441460 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
RFTN1-204ENST00000441460 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
RFTN1-204ENST00000441460 C9orf78Q9NZ63 289 aaPredicted RBP17.12■□□□□ 0.33
RFTN1-204ENST00000441460 PCNTO95613 3336 aa17.12■□□□□ 0.33
RFTN1-204ENST00000441460 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
RFTN1-204ENST00000441460 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
RFTN1-204ENST00000441460 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
RFTN1-204ENST00000441460 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
RFTN1-204ENST00000441460 SUCLG2Q96I99 432 aa17.11■□□□□ 0.33
RFTN1-204ENST00000441460 CNOT7Q9UIV1 285 aaKnown RBP17.11■□□□□ 0.33
RFTN1-204ENST00000441460 UTYO14607 1347 aa17.11■□□□□ 0.33
RFTN1-204ENST00000441460 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 DPF2Q92785 391 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 MPHOSPH8Q99549 860 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 CREBZFQ9NS37 354 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 SMC4Q9NTJ3 1288 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
RFTN1-204ENST00000441460 EGFRP00533 1210 aa17.09■□□□□ 0.33
RFTN1-204ENST00000441460 VIL1P09327 827 aaKnown RBP17.09■□□□□ 0.33
RFTN1-204ENST00000441460 CT47B1P0C2W7 299 aaPredicted RBP17.09■□□□□ 0.33
RFTN1-204ENST00000441460 KLRK1P26718 216 aa17.09■□□□□ 0.33
RFTN1-204ENST00000441460 CHRNDQ07001 517 aa17.09■□□□□ 0.33
RFTN1-204ENST00000441460 IFIT5Q13325 482 aaKnown RBP17.09■□□□□ 0.33
RFTN1-204ENST00000441460 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
RFTN1-204ENST00000441460 ZNF594Q96JF6 807 aaPredicted RBP17.09■□□□□ 0.33
RFTN1-204ENST00000441460 SNAP23O00161 211 aa17.08■□□□□ 0.32
RFTN1-204ENST00000441460 PGAP2Q9UHJ9 254 aa17.08■□□□□ 0.32
RFTN1-204ENST00000441460 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
RFTN1-204ENST00000441460 RPS12P25398 132 aaKnown RBP17.07■□□□□ 0.32
RFTN1-204ENST00000441460 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
RFTN1-204ENST00000441460 ANKRD2Q9GZV1 360 aa17.07■□□□□ 0.32
RFTN1-204ENST00000441460 USP44Q9H0E7 712 aa17.07■□□□□ 0.32
RFTN1-204ENST00000441460 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
RFTN1-204ENST00000441460 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 TMEM88BA6NKF7 163 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 G3V3G9 751 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 H7C1D1 291 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 TRAF5O00463 557 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 TAF5LO75529 589 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 RARSP54136 660 aaKnown RBP17.06■□□□□ 0.32
RFTN1-204ENST00000441460 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-204ENST00000441460 DCAF8Q5TAQ9 597 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
RFTN1-204ENST00000441460 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
RFTN1-204ENST00000441460 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
RFTN1-204ENST00000441460 NOB1Q9ULX3 412 aaKnown RBP17.06■□□□□ 0.32
RFTN1-204ENST00000441460 ZNF609O15014 1411 aa17.05■□□□□ 0.32
RFTN1-204ENST00000441460 PSME4Q14997 1843 aa17.05■□□□□ 0.32
RFTN1-204ENST00000441460 CCDC57Q2TAC2 916 aa17.05■□□□□ 0.32
RFTN1-204ENST00000441460 RABL6Q3YEC7 729 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-204ENST00000441460 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-204ENST00000441460 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
RFTN1-204ENST00000441460 GMLQ99445 158 aa17.05■□□□□ 0.32
RFTN1-204ENST00000441460 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms