RNA–Protein interactions for RNA: ENST00000441368.5

SEC61A2-209, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-209ENST00000441368 GGA1Q9UJY5 639 aa23.38■■□□□ 1.33
SEC61A2-209ENST00000441368 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
SEC61A2-209ENST00000441368 ECE2O60344 883 aa23.37■■□□□ 1.33
SEC61A2-209ENST00000441368 ITGBL1O95965 494 aaPredicted RBP23.37■■□□□ 1.33
SEC61A2-209ENST00000441368 GREM2Q9H772 168 aa23.36■■□□□ 1.33
SEC61A2-209ENST00000441368 GCKRQ14397 625 aa23.35■■□□□ 1.33
SEC61A2-209ENST00000441368 ABT1Q9ULW3 272 aaKnown RBP23.35■■□□□ 1.33
SEC61A2-209ENST00000441368 F6X3S4 739 aa23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 H7C1D1 291 aa23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 PSMD14O00487 310 aa23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 LINS1Q8NG48 757 aa23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 TTLL11Q8NHH1 800 aa23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 ZBTB12Q9Y330 459 aaPredicted RBP23.34■■□□□ 1.33
SEC61A2-209ENST00000441368 XDHP47989 1333 aa23.33■■□□□ 1.33
SEC61A2-209ENST00000441368 MICALL2Q8IY33 904 aa23.33■■□□□ 1.33
SEC61A2-209ENST00000441368 PODXL2Q9NZ53 605 aa23.33■■□□□ 1.33
SEC61A2-209ENST00000441368 CNOT7Q9UIV1 285 aaKnown RBP23.33■■□□□ 1.33
SEC61A2-209ENST00000441368 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
SEC61A2-209ENST00000441368 H7C1W4 665 aa23.32■■□□□ 1.32
SEC61A2-209ENST00000441368 IGHMBP2P38935 993 aaKnown RBP23.32■■□□□ 1.32
SEC61A2-209ENST00000441368 SHTN1A0MZ66 631 aa23.31■■□□□ 1.32
SEC61A2-209ENST00000441368 HSPA1AP0DMV8 641 aaKnown RBP23.31■■□□□ 1.32
SEC61A2-209ENST00000441368 HSPA1BP0DMV9 641 aaKnown RBP23.31■■□□□ 1.32
SEC61A2-209ENST00000441368 PAXIP1Q6ZW49 1069 aaPredicted RBP23.31■■□□□ 1.32
SEC61A2-209ENST00000441368 CHMP3Q9Y3E7 222 aa23.31■■□□□ 1.32
SEC61A2-209ENST00000441368 TRAF5O00463 557 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 ATP2B4P23634 1241 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 FMR1Q06787 632 aaKnown RBP eCLIP23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 TRPM4Q8TD43 1214 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 KCNQ5Q9NR82 932 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 TRPM7Q96QT4 1865 aa23.3■■□□□ 1.32
SEC61A2-209ENST00000441368 ITGA6P23229 1130 aa23.29■■□□□ 1.32
SEC61A2-209ENST00000441368 MPHOSPH8Q99549 860 aa23.29■■□□□ 1.32
SEC61A2-209ENST00000441368 RTL9Q8NET4 1388 aa23.28■■□□□ 1.32
SEC61A2-209ENST00000441368 TBC1D10BQ4KMP7 808 aaPredicted RBP23.28■■□□□ 1.32
SEC61A2-209ENST00000441368 RBM26Q5T8P6 1007 aaKnown RBP23.28■■□□□ 1.32
SEC61A2-209ENST00000441368 ZNF408Q9H9D4 720 aa23.28■■□□□ 1.32
SEC61A2-209ENST00000441368 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
SEC61A2-209ENST00000441368 SCN9AQ15858 1988 aa23.27■■□□□ 1.32
SEC61A2-209ENST00000441368 GRM1Q13255 1194 aa23.27■■□□□ 1.32
SEC61A2-209ENST00000441368 GLIS2Q9BZE0 524 aaPredicted RBP23.27■■□□□ 1.32
SEC61A2-209ENST00000441368 MINPP1Q9UNW1 487 aa23.27■■□□□ 1.32
SEC61A2-209ENST00000441368 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 DEFB115Q30KQ5 88 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 SAMD7Q7Z3H4 446 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 DPF2Q92785 391 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 FBXW7Q969H0 707 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 PLA2G12BQ9BX93 195 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 ZNF521Q96K83 1311 aa23.26■■□□□ 1.31
SEC61A2-209ENST00000441368 ANKRD18BA2A2Z9 1011 aa23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 KCNJ4P48050 445 aa23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 VEGFBP49765 207 aa23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 CASP7P55210 303 aa23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 BEND3Q5T5X7 828 aa23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 C9orf78Q9NZ63 289 aaPredicted RBP23.25■■□□□ 1.31
SEC61A2-209ENST00000441368 E9PSI1 815 aa23.24■■□□□ 1.31
SEC61A2-209ENST00000441368 CCT4P50991 539 aaKnown RBP23.24■■□□□ 1.31
SEC61A2-209ENST00000441368 HIRAP54198 1017 aaPredicted RBP23.24■■□□□ 1.31
SEC61A2-209ENST00000441368 CELF2O95319 508 aaKnown RBP23.23■■□□□ 1.31
SEC61A2-209ENST00000441368 TAF7LQ5H9L4 462 aa23.23■■□□□ 1.31
SEC61A2-209ENST00000441368 IFFO2Q5TF58 517 aa23.23■■□□□ 1.31
SEC61A2-209ENST00000441368 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
SEC61A2-209ENST00000441368 MED23Q9ULK4 1368 aa23.23■■□□□ 1.31
SEC61A2-209ENST00000441368 PSME4Q14997 1843 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 RASSF10A6NK89 507 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 GRM8O00222 908 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 IFIT5Q13325 482 aaKnown RBP23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 KIF4BQ2VIQ3 1234 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 CDC37L1Q7L3B6 337 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 AIDAQ96BJ3 306 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 SRCIN1Q9C0H9 1055 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 ANKRD2Q9GZV1 360 aa23.22■■□□□ 1.31
SEC61A2-209ENST00000441368 WTIPA6NIX2 430 aaPredicted RBP23.21■■□□□ 1.31
SEC61A2-209ENST00000441368 CSF1RP07333 972 aa23.21■■□□□ 1.31
SEC61A2-209ENST00000441368 VIL1P09327 827 aaKnown RBP23.21■■□□□ 1.31
SEC61A2-209ENST00000441368 RSBN1LQ6PCB5 846 aaPredicted RBP23.21■■□□□ 1.31
SEC61A2-209ENST00000441368 USP17L3A6NCW0 530 aa23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 USP17L4A6NCW7 530 aa23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 USP17L1Q7RTZ2 530 aa23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 USP48Q86UV5 1035 aa23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 LEMD3Q9Y2U8 911 aa23.2■■□□□ 1.3
SEC61A2-209ENST00000441368 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 WDR33Q9C0J8 1336 aaKnown RBP23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 ALDH1L1O75891 902 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 EGFRP00533 1210 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 CCDC57Q2TAC2 916 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 COL13A1Q5TAT6 717 aaPredicted RBP23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 CST9Q5W186 159 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 LMBR1LQ6UX01 489 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 PODNQ7Z5L7 613 aa23.19■■□□□ 1.3
SEC61A2-209ENST00000441368 ECE1P42892 770 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 FOXO4P98177 505 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 CHRNDQ07001 517 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 PGAP2Q9UHJ9 254 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 PCNTO95613 3336 aa23.18■■□□□ 1.3
SEC61A2-209ENST00000441368 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms