RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 MYH3P11055 1940 aa11.11□□□□□ -0.63
HDAC6-209ENST00000440653 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
HDAC6-209ENST00000440653 DEKP35659 375 aaKnown RBP11.1□□□□□ -0.63
HDAC6-209ENST00000440653 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC6-209ENST00000440653 SLC39A6Q13433 755 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 GCKRQ14397 625 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 LRP10Q7Z4F1 713 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 XAGE3Q8WTP9 111 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 LAMB2P55268 1798 aa11.1□□□□□ -0.63
HDAC6-209ENST00000440653 RAD50Q92878 1312 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 HIP1O00291 1037 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
HDAC6-209ENST00000440653 ADRA2BP18089 450 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 DDIT3P35638 169 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 ECE1P42892 770 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 ANKRD13DQ6ZTN6 518 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 PI4K2BQ8TCG2 481 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-209ENST00000440653 ATG3Q9NT62 314 aa11.09□□□□□ -0.63
HDAC6-209ENST00000440653 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 A0A0C4DFX4 3053 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 PRAMEF22A3QJZ6 481 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 RPS6KA4O75676 772 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 IGKV5-2P06315 115 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 CHMLP26374 656 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
HDAC6-209ENST00000440653 RABL6Q3YEC7 729 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-209ENST00000440653 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 RUFY2Q8WXA3 655 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 GBP4Q96PP9 640 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 ECHDC1Q9NTX5 307 aa11.08□□□□□ -0.64
HDAC6-209ENST00000440653 SCN4AP35499 1836 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
HDAC6-209ENST00000440653 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
HDAC6-209ENST00000440653 MYL6BP14649 208 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 TM4SF1P30408 202 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 AIMP1Q12904 312 aaKnown RBP11.07□□□□□ -0.64
HDAC6-209ENST00000440653 G3BP1Q13283 466 aaKnown RBP eCLIP11.07□□□□□ -0.648e-6■□□□□ 9
HDAC6-209ENST00000440653 TICAM2Q86XR7 235 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-209ENST00000440653 MYD88Q99836 296 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 BICC1Q9H694 974 aaKnown RBP11.07□□□□□ -0.64
HDAC6-209ENST00000440653 IL1RAPL2Q9NP60 686 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 SZT2Q5T011 3432 aa11.07□□□□□ -0.64
HDAC6-209ENST00000440653 C21orf2O43822 256 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 FRAT2O75474 233 aaPredicted RBP11.06□□□□□ -0.64
HDAC6-209ENST00000440653 MAP2K2P36507 400 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
HDAC6-209ENST00000440653 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 RILPL2Q969X0 211 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 COPRSQ9NQ92 184 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
HDAC6-209ENST00000440653 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 DLEC1Q9Y238 1755 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 CA12O43570 354 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 GSE1Q14687 1217 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 RAB3GAP1Q15042 981 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 FER1L6Q2WGJ9 1857 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 CST9Q5W186 159 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 C2CD5Q86YS7 1000 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 EVI5LQ96CN4 794 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
HDAC6-209ENST00000440653 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
HDAC6-209ENST00000440653 MKI67P46013 3256 aaKnown RBP11.05□□□□□ -0.64
HDAC6-209ENST00000440653 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-209ENST00000440653 ZNF609O15014 1411 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 SGSM2O43147 1006 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 EPHX2P34913 555 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 NUCB2P80303 420 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 CIAPIN1Q6FI81 312 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 CCDC191Q8NCU4 936 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 RBM42Q9BTD8 480 aaKnown RBP11.04□□□□□ -0.64
HDAC6-209ENST00000440653 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 CWC25Q9NXE8 425 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-209ENST00000440653 USP16Q9Y5T5 823 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 NUP98P52948 1817 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
HDAC6-209ENST00000440653 GOLGA6L22H0YM25 854 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 MCM4P33991 863 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 TSHZ3Q63HK5 1081 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 KIAA1211Q6ZU35 1233 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 AACSQ86V21 672 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 KAZALD1Q96I82 304 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 HACL1Q9UJ83 578 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 MYH7P12883 1935 aa11.03□□□□□ -0.64
HDAC6-209ENST00000440653 ZNF541Q9H0D2 1346 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms