RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 TBC1D16Q8TBP0 767 aa17.01■□□□□ 0.31
SP4-203ENST00000440636 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
SP4-203ENST00000440636 EYA3Q99504 573 aa17.01■□□□□ 0.31
SP4-203ENST00000440636 GBA2Q9HCG7 927 aaPredicted RBP17.01■□□□□ 0.31
SP4-203ENST00000440636 HYPKQ9NX55 129 aa17.01■□□□□ 0.31
SP4-203ENST00000440636 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
SP4-203ENST00000440636 DGKZQ13574 1117 aa17■□□□□ 0.31
SP4-203ENST00000440636 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
SP4-203ENST00000440636 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
SP4-203ENST00000440636 MYBBP1AQ9BQG0 1328 aaKnown RBP16.99■□□□□ 0.31
SP4-203ENST00000440636 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
SP4-203ENST00000440636 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
SP4-203ENST00000440636 DCPSQ96C86 337 aaKnown RBP16.99■□□□□ 0.31
SP4-203ENST00000440636 CFAP44Q96MT7 982 aa16.99■□□□□ 0.31
SP4-203ENST00000440636 PODXL2Q9NZ53 605 aa16.99■□□□□ 0.31
SP4-203ENST00000440636 TNRC18O15417 2968 aaPredicted RBP16.99■□□□□ 0.31
SP4-203ENST00000440636 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
SP4-203ENST00000440636 ZBTB38Q8NAP3 1195 aaPredicted RBP16.98■□□□□ 0.31
SP4-203ENST00000440636 CCDC102AQ96A19 550 aa16.98■□□□□ 0.31
SP4-203ENST00000440636 SEC31BQ9NQW1 1179 aa16.98■□□□□ 0.31
SP4-203ENST00000440636 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
SP4-203ENST00000440636 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
SP4-203ENST00000440636 MBIPQ9NS73 344 aa16.97■□□□□ 0.31
SP4-203ENST00000440636 SAGE1Q9NXZ1 904 aa16.97■□□□□ 0.31
SP4-203ENST00000440636 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
SP4-203ENST00000440636 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
SP4-203ENST00000440636 PDE4DIPQ5VU43 2346 aa16.97■□□□□ 0.31
SP4-203ENST00000440636 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
SP4-203ENST00000440636 ZNF609O15014 1411 aa16.96■□□□□ 0.31
SP4-203ENST00000440636 UFL1O94874 794 aa16.96■□□□□ 0.31
SP4-203ENST00000440636 ZNF157P51786 506 aaPredicted RBP16.96■□□□□ 0.31
SP4-203ENST00000440636 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
SP4-203ENST00000440636 RIC3Q7Z5B4 369 aa16.96■□□□□ 0.31
SP4-203ENST00000440636 ZNF853P0CG23 659 aa16.95■□□□□ 0.3
SP4-203ENST00000440636 ZNF280AP59817 542 aaPredicted RBP16.95■□□□□ 0.3
SP4-203ENST00000440636 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
SP4-203ENST00000440636 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
SP4-203ENST00000440636 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
SP4-203ENST00000440636 ANKIB1Q9P2G1 1089 aa16.95■□□□□ 0.3
SP4-203ENST00000440636 GGA1Q9UJY5 639 aa16.95■□□□□ 0.3
SP4-203ENST00000440636 SLC10A3P09131 477 aa16.94■□□□□ 0.3
SP4-203ENST00000440636 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
SP4-203ENST00000440636 RSBN1LQ6PCB5 846 aaPredicted RBP16.94■□□□□ 0.3
SP4-203ENST00000440636 CDCA5Q96FF9 252 aa16.94■□□□□ 0.3
SP4-203ENST00000440636 RNF186Q9NXI6 227 aa16.94■□□□□ 0.3
SP4-203ENST00000440636 PSME4Q14997 1843 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 MYD88Q99836 296 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
SP4-203ENST00000440636 G3V3G9 751 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 PDE8AO60658 829 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 TRPA1O75762 1119 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 PCCAP05165 728 aaPredicted RBP16.92■□□□□ 0.3
SP4-203ENST00000440636 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
SP4-203ENST00000440636 SCARF1Q14162 830 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
SP4-203ENST00000440636 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 GMLQ99445 158 aa16.92■□□□□ 0.3
SP4-203ENST00000440636 JARID2Q92833 1246 aaPredicted RBP16.91■□□□□ 0.3
SP4-203ENST00000440636 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
SP4-203ENST00000440636 IFT57Q9NWB7 429 aa16.91■□□□□ 0.3
SP4-203ENST00000440636 CWC25Q9NXE8 425 aaPredicted RBP16.91■□□□□ 0.3
SP4-203ENST00000440636 XDHP47989 1333 aa16.91■□□□□ 0.3
SP4-203ENST00000440636 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
SP4-203ENST00000440636 RASAL3Q86YV0 1011 aa16.9■□□□□ 0.3
SP4-203ENST00000440636 MYOZ2Q9NPC6 264 aa16.9■□□□□ 0.3
SP4-203ENST00000440636 PAPPA2Q9BXP8 1791 aa16.89■□□□□ 0.3
SP4-203ENST00000440636 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
SP4-203ENST00000440636 FKBP1BP68106 108 aa16.89■□□□□ 0.29
SP4-203ENST00000440636 PODNQ7Z5L7 613 aa16.89■□□□□ 0.29
SP4-203ENST00000440636 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
SP4-203ENST00000440636 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
SP4-203ENST00000440636 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
SP4-203ENST00000440636 USP17L3A6NCW0 530 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 USP17L4A6NCW7 530 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 ATP2B4P23634 1241 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 GNAI1P63096 354 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 USP17L1Q7RTZ2 530 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
SP4-203ENST00000440636 C8orf58Q8NAV2 365 aa16.88■□□□□ 0.29
SP4-203ENST00000440636 WTIPA6NIX2 430 aaPredicted RBP16.87■□□□□ 0.29
SP4-203ENST00000440636 APAF1O14727 1248 aa16.87■□□□□ 0.29
SP4-203ENST00000440636 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
SP4-203ENST00000440636 CTSWP56202 376 aa16.86■□□□□ 0.29
SP4-203ENST00000440636 SOX10P56693 466 aa16.86■□□□□ 0.29
SP4-203ENST00000440636 CALD1Q05682 793 aaKnown RBP16.86■□□□□ 0.29
SP4-203ENST00000440636 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
SP4-203ENST00000440636 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
SP4-203ENST00000440636 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
SP4-203ENST00000440636 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
SP4-203ENST00000440636 ZNF646O15015 1829 aaPredicted RBP16.85■□□□□ 0.29
SP4-203ENST00000440636 IGKV5-2P06315 115 aa16.85■□□□□ 0.29
SP4-203ENST00000440636 NBPF9Q3BBW0 867 aa16.85■□□□□ 0.29
SP4-203ENST00000440636 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
SP4-203ENST00000440636 TTLL11Q8NHH1 800 aa16.85■□□□□ 0.29
SP4-203ENST00000440636 CDC5LQ99459 802 aaKnown RBP16.85■□□□□ 0.29
SP4-203ENST00000440636 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms