RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
CCDC66-207ENST00000439445 RTFDC1Q9BY42 306 aaPredicted RBP12.85□□□□□ -0.35
CCDC66-207ENST00000439445 LAS1LQ9Y4W2 734 aaKnown RBP12.85□□□□□ -0.35
CCDC66-207ENST00000439445 RAD17O75943 681 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 HSPA8P11142 646 aaKnown RBP12.84□□□□□ -0.35
CCDC66-207ENST00000439445 ECE1P42892 770 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 GMPSP49915 693 aaPredicted RBP12.84□□□□□ -0.35
CCDC66-207ENST00000439445 CIAPIN1Q6FI81 312 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 CYP4F22Q6NT55 531 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
CCDC66-207ENST00000439445 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 TRPM7Q96QT4 1865 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
CCDC66-207ENST00000439445 CHL1O00533 1208 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 KIAA2012Q0VF49 1180 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 GRAPQ13588 217 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 TNIP1Q15025 636 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
CCDC66-207ENST00000439445 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
CCDC66-207ENST00000439445 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
CCDC66-207ENST00000439445 LAMB2P55268 1798 aa12.82□□□□□ -0.36
CCDC66-207ENST00000439445 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
CCDC66-207ENST00000439445 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
CCDC66-207ENST00000439445 TLL2Q9Y6L7 1015 aa12.82□□□□□ -0.36
CCDC66-207ENST00000439445 TAF1P21675 1872 aa12.81□□□□□ -0.36
CCDC66-207ENST00000439445 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
CCDC66-207ENST00000439445 ANKRD13DQ6ZTN6 518 aa12.81□□□□□ -0.36
CCDC66-207ENST00000439445 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
CCDC66-207ENST00000439445 PLBD2Q8NHP8 589 aa12.81□□□□□ -0.36
CCDC66-207ENST00000439445 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
CCDC66-207ENST00000439445 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 AOC2O75106 756 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
CCDC66-207ENST00000439445 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC66-207ENST00000439445 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 ZC3H15Q8WU90 426 aaKnown RBP12.8□□□□□ -0.36
CCDC66-207ENST00000439445 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
CCDC66-207ENST00000439445 H7C1D1 291 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 MAP2K2P36507 400 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 HIRAP54198 1017 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 WASHC4Q2M389 1173 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 ABHD8Q96I13 439 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 ZNF408Q9H9D4 720 aa12.79□□□□□ -0.36
CCDC66-207ENST00000439445 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
CCDC66-207ENST00000439445 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 C6orf229H3BNL8 230 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 RIMBP2O15034 1052 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 TRPM4Q8TD43 1214 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
CCDC66-207ENST00000439445 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 TSKSQ9UJT2 592 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
CCDC66-207ENST00000439445 HOXB7P09629 217 aa12.77□□□□□ -0.37
CCDC66-207ENST00000439445 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
CCDC66-207ENST00000439445 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
CCDC66-207ENST00000439445 MICALL2Q8IY33 904 aa12.77□□□□□ -0.37
CCDC66-207ENST00000439445 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CCDC66-207ENST00000439445 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
CCDC66-207ENST00000439445 PSMD14O00487 310 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 IRS4O14654 1257 aaPredicted RBP12.76□□□□□ -0.37
CCDC66-207ENST00000439445 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 DPF2Q92785 391 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 HHIPL1Q96JK4 782 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 POLLQ9UGP5 575 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
CCDC66-207ENST00000439445 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
CCDC66-207ENST00000439445 GPSM2P81274 684 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
CCDC66-207ENST00000439445 DOK7Q18PE1 504 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
CCDC66-207ENST00000439445 RBM26Q5T8P6 1007 aaKnown RBP12.75□□□□□ -0.37
CCDC66-207ENST00000439445 RIC3Q7Z5B4 369 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 DDX60Q8IY21 1712 aaKnown RBP12.75□□□□□ -0.37
CCDC66-207ENST00000439445 THSD7BQ9C0I4 1608 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 KCNQ5Q9NR82 932 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
CCDC66-207ENST00000439445 POLR2AP24928 1970 aaKnown RBP12.74□□□□□ -0.37
CCDC66-207ENST00000439445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.74□□□□□ -0.37
CCDC66-207ENST00000439445 CCDC85CA6NKD9 419 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 G3V3G9 751 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 CA12O43570 354 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 ECE2O60344 883 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 HUNKP57058 714 aa12.74□□□□□ -0.37
CCDC66-207ENST00000439445 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms