RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 CALML4Q96GE6 196 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 TRIM47Q96LD4 638 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 PRC1O43663 620 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 BMP15O95972 392 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 MATR3P43243 847 aaKnown RBP eCLIP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 RRAGBQ5VZM2 374 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 DHX32Q7L7V1 743 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 TEX13AQ9BXU3 409 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 ZFYVE9O95405 1425 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 AKR1B10O60218 316 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 G2E3Q7L622 706 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 GIMAP7Q8NHV1 300 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 IFNKQ9P0W0 207 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 MSH6P52701 1360 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 MPHOSPH10O00566 681 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 APOBRQ0VD83 1088 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 SLC39A6Q13433 755 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 CCDC40Q4G0X9 1142 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 RMND1Q9NWS8 449 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 RAD50Q92878 1312 aa12.81□□□□□ -0.36
SEMA4D-211ENST00000438547 TRIM21P19474 475 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 PAG1Q9NWQ8 432 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 TSPY2A6NKD2 308 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 CETN2P41208 172 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 ATP2B3Q16720 1220 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 KRT23Q9C075 422 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 CCDC175P0C221 793 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 NBPF7P0C2Y1 421 aaPredicted RBP12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 RTN1Q16799 776 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 FEZ1Q99689 392 aa12.8□□□□□ -0.36
SEMA4D-211ENST00000438547 NUTM2BA6NNL0 878 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 NUTM2EB1AL46 878 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 CHST3Q7LGC8 479 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 NUTM2AQ8IVF1 878 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 TMCO5BA8MYB1 307 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 GBP2P32456 591 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 SYT10Q6XYQ8 523 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 A2MP01023 1474 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 NPATQ14207 1427 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 IGSF3O75054 1194 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 CYLC1P35663 651 aaPredicted RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 FLT4P35916 1363 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 PDE4BQ07343 736 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 EYA1Q99502 592 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
SEMA4D-211ENST00000438547 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 CNNM2Q9H8M5 875 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 IBSPP21815 317 aaPredicted RBP12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 NOP2P46087 812 aaKnown RBP12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 SLC9C2Q5TAH2 1124 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 OGFRQ9NZT2 677 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 ANKIB1Q9P2G1 1089 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 MYO1BO43795 1136 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 CCDC96Q2M329 555 aa12.78□□□□□ -0.36
SEMA4D-211ENST00000438547 POTEJP0CG39 1038 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 ATL3Q6DD88 541 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 MAATS1Q7Z4T9 603 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 BRAPQ7Z569 592 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 ESR2Q92731 530 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 CDC5LQ99459 802 aaKnown RBP12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 SNX14Q9Y5W7 946 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 TERF1P54274 439 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 VAT1LQ9HCJ6 419 aa12.77□□□□□ -0.36
SEMA4D-211ENST00000438547 GSTTP1A0A1W2PQM5 241 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 CTAGE9A4FU28 777 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 TRIM75PA6NK02 468 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 SGSM2O43147 1006 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 FAM173BQ6P4H8 233 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 EZRP15311 586 aaKnown RBP12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 DHX58Q96C10 678 aa12.77□□□□□ -0.37
SEMA4D-211ENST00000438547 A0A1B0GVL5 298 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 IVLP07476 585 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 GPATCH11Q8N954 259 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 EXOC1Q9NV70 894 aa12.76□□□□□ -0.37
SEMA4D-211ENST00000438547 WDR62O43379 1518 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms