RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 LRRFIP2Q9Y608 721 aaKnown RBP29.93■■■□□ 2.38
RBFOX2-209ENST00000438146 DUOX1Q9NRD9 1551 aa29.93■■■□□ 2.38
RBFOX2-209ENST00000438146 PANK1Q8TE04 598 aa29.92■■■□□ 2.38
RBFOX2-209ENST00000438146 ITPRIPQ8IWB1 547 aa29.91■■■□□ 2.38
RBFOX2-209ENST00000438146 TBC1D16Q8TBP0 767 aa29.91■■■□□ 2.38
RBFOX2-209ENST00000438146 COL4A5P29400 1685 aa29.91■■■□□ 2.38
RBFOX2-209ENST00000438146 UFL1O94874 794 aa29.9■■■□□ 2.38
RBFOX2-209ENST00000438146 JDP2Q8WYK2 163 aa29.9■■■□□ 2.38
RBFOX2-209ENST00000438146 RIMBP2O15034 1052 aa29.9■■■□□ 2.38
RBFOX2-209ENST00000438146 GPBP1L1Q9HC44 474 aaPredicted RBP29.9■■■□□ 2.38
RBFOX2-209ENST00000438146 GGA1Q9UJY5 639 aa29.9■■■□□ 2.38
RBFOX2-209ENST00000438146 ZC3H4Q9UPT8 1303 aaKnown RBP29.89■■■□□ 2.38
RBFOX2-209ENST00000438146 WTIPA6NIX2 430 aaPredicted RBP29.89■■■□□ 2.37
RBFOX2-209ENST00000438146 GNAI3P08754 354 aa29.89■■■□□ 2.37
RBFOX2-209ENST00000438146 PODXL2Q9NZ53 605 aa29.89■■■□□ 2.37
RBFOX2-209ENST00000438146 XDHP47989 1333 aa29.88■■■□□ 2.37
RBFOX2-209ENST00000438146 WASHC4Q2M389 1173 aa29.88■■■□□ 2.37
RBFOX2-209ENST00000438146 NIM1KQ8IY84 436 aa29.88■■■□□ 2.37
RBFOX2-209ENST00000438146 DICER1Q9UPY3 1922 aaKnown RBP29.87■■■□□ 2.37
RBFOX2-209ENST00000438146 KIAA2012Q0VF49 1180 aa29.87■■■□□ 2.37
RBFOX2-209ENST00000438146 LDHAL6AQ6ZMR3 332 aa29.87■■■□□ 2.37
RBFOX2-209ENST00000438146 KLHDC4Q8TBB5 520 aa29.87■■■□□ 2.37
RBFOX2-209ENST00000438146 CNNM1Q9NRU3 951 aa29.87■■■□□ 2.37
RBFOX2-209ENST00000438146 ZNF541Q9H0D2 1346 aa29.86■■■□□ 2.37
RBFOX2-209ENST00000438146 LTBP1Q14766 1721 aa29.86■■■□□ 2.37
RBFOX2-209ENST00000438146 CHRNDQ07001 517 aa29.86■■■□□ 2.37
RBFOX2-209ENST00000438146 HELBQ8NG08 1087 aaPredicted RBP29.86■■■□□ 2.37
RBFOX2-209ENST00000438146 HDAC5Q9UQL6 1122 aa29.86■■■□□ 2.37
RBFOX2-209ENST00000438146 GLTPD2A6NH11 291 aa29.85■■■□□ 2.37
RBFOX2-209ENST00000438146 EYA3Q99504 573 aa29.85■■■□□ 2.37
RBFOX2-209ENST00000438146 PUS3Q9BZE2 481 aaKnown RBP29.85■■■□□ 2.37
RBFOX2-209ENST00000438146 NMRK2Q9NPI5 230 aa29.85■■■□□ 2.37
RBFOX2-209ENST00000438146 KDM2BQ8NHM5 1336 aa29.85■■■□□ 2.37
RBFOX2-209ENST00000438146 ATP2B4P23634 1241 aa29.84■■■□□ 2.37
RBFOX2-209ENST00000438146 DPY19L2Q6NUT2 758 aa29.84■■■□□ 2.37
RBFOX2-209ENST00000438146 VPS33BQ9H267 617 aa29.84■■■□□ 2.37
RBFOX2-209ENST00000438146 FZD9O00144 591 aa29.83■■■□□ 2.37
RBFOX2-209ENST00000438146 TAF5LO75529 589 aa29.83■■■□□ 2.37
RBFOX2-209ENST00000438146 DDNO94850 711 aaPredicted RBP29.83■■■□□ 2.37
RBFOX2-209ENST00000438146 DOK7Q18PE1 504 aa29.83■■■□□ 2.37
RBFOX2-209ENST00000438146 ANKRD2Q9GZV1 360 aa29.83■■■□□ 2.37
RBFOX2-209ENST00000438146 GNAI2P04899 355 aa29.82■■■□□ 2.36
RBFOX2-209ENST00000438146 ZC3H12CQ9C0D7 883 aaKnown RBP29.82■■■□□ 2.36
RBFOX2-209ENST00000438146 DBNDD1Q9H9R9 158 aa29.82■■■□□ 2.36
RBFOX2-209ENST00000438146 MS4A1P11836 297 aa29.81■■■□□ 2.36
RBFOX2-209ENST00000438146 EIF6P56537 245 aaKnown RBP29.81■■■□□ 2.36
RBFOX2-209ENST00000438146 C1orf115Q9H7X2 142 aa29.81■■■□□ 2.36
RBFOX2-209ENST00000438146 SNAP23O00161 211 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 KCNJ4P48050 445 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 RFX5P48382 616 aaPredicted RBP29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 LRRC24Q50LG9 513 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 C20orf194Q5TEA3 1177 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 RRAGCQ9HB90 399 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 ZNRF3Q9ULT6 936 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 COG6Q9Y2V7 657 aa29.8■■■□□ 2.36
RBFOX2-209ENST00000438146 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.79■■■□□ 2.36
RBFOX2-209ENST00000438146 GJA3Q9Y6H8 435 aa29.79■■■□□ 2.36
RBFOX2-209ENST00000438146 ZNF804BA4D1E1 1349 aa29.78■■■□□ 2.36
RBFOX2-209ENST00000438146 ZBTB7BO15156 539 aaPredicted RBP29.78■■■□□ 2.36
RBFOX2-209ENST00000438146 LEMD3Q9Y2U8 911 aa29.78■■■□□ 2.36
RBFOX2-209ENST00000438146 G3V3G9 751 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 KLRK1P26718 216 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 DCAF8Q5TAQ9 597 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 YDJCA8MPS7 323 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 SRGAP3O43295 1099 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 RAD17O75943 681 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 PTPN12Q05209 780 aaKnown RBP29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 SIL1Q9H173 461 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 RIPOR2Q9Y4F9 1068 aa29.77■■■□□ 2.36
RBFOX2-209ENST00000438146 ECE2O60344 883 aa29.76■■■□□ 2.35
RBFOX2-209ENST00000438146 MVPQ14764 893 aaKnown RBP29.76■■■□□ 2.35
RBFOX2-209ENST00000438146 PA2G4Q9UQ80 394 aaKnown RBP29.76■■■□□ 2.35
RBFOX2-209ENST00000438146 CXCL9Q07325 125 aa29.75■■■□□ 2.35
RBFOX2-209ENST00000438146 TXNRD3Q86VQ6 643 aa29.75■■■□□ 2.35
RBFOX2-209ENST00000438146 METTL24Q5JXM2 366 aa29.74■■■□□ 2.35
RBFOX2-209ENST00000438146 KCNQ5Q9NR82 932 aa29.74■■■□□ 2.35
RBFOX2-209ENST00000438146 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
RBFOX2-209ENST00000438146 MROH5Q6ZUA9 1318 aa29.73■■■□□ 2.35
RBFOX2-209ENST00000438146 KIF3CO14782 793 aa29.73■■■□□ 2.35
RBFOX2-209ENST00000438146 GPC2Q8N158 579 aa29.73■■■□□ 2.35
RBFOX2-209ENST00000438146 PNMA6EA0A0J9YXQ4 647 aa29.72■■■□□ 2.35
RBFOX2-209ENST00000438146 EYA2O00167 538 aa29.72■■■□□ 2.35
RBFOX2-209ENST00000438146 MTX1Q13505 466 aa29.71■■■□□ 2.35
RBFOX2-209ENST00000438146 PDE3AQ14432 1141 aa29.71■■■□□ 2.35
RBFOX2-209ENST00000438146 CIAPIN1Q6FI81 312 aa29.71■■■□□ 2.35
RBFOX2-209ENST00000438146 A0A1B0GUL6 1792 aa29.71■■■□□ 2.35
RBFOX2-209ENST00000438146 POTECB2RU33 542 aa29.7■■■□□ 2.35
RBFOX2-209ENST00000438146 DDX19BQ9UMR2 479 aa29.7■■■□□ 2.35
RBFOX2-209ENST00000438146 VEGFAP15692 232 aaPredicted RBP29.69■■■□□ 2.34
RBFOX2-209ENST00000438146 RRP1P56182 461 aaKnown RBP29.69■■■□□ 2.34
RBFOX2-209ENST00000438146 ATG9AQ7Z3C6 839 aa29.69■■■□□ 2.34
RBFOX2-209ENST00000438146 WDR90Q96KV7 1748 aa29.68■■■□□ 2.34
RBFOX2-209ENST00000438146 PSMD14O00487 310 aa29.67■■■□□ 2.34
RBFOX2-209ENST00000438146 TNIP1Q15025 636 aa29.67■■■□□ 2.34
RBFOX2-209ENST00000438146 L3MBTL3Q96JM7 780 aaPredicted RBP29.67■■■□□ 2.34
RBFOX2-209ENST00000438146 COPRSQ9NQ92 184 aa29.67■■■□□ 2.34
RBFOX2-209ENST00000438146 PDE8BO95263 885 aa29.66■■■□□ 2.34
RBFOX2-209ENST00000438146 VGLL2Q8N8G2 317 aa29.66■■■□□ 2.34
RBFOX2-209ENST00000438146 IRS2Q9Y4H2 1338 aa29.66■■■□□ 2.34
RBFOX2-209ENST00000438146 UBE4AQ14139 1066 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms