RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
PTCH2-202ENST00000438067 RTL9Q8NET4 1388 aa22.47■■□□□ 1.19
PTCH2-202ENST00000438067 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
PTCH2-202ENST00000438067 GOLGA2Q08379 1002 aa22.46■■□□□ 1.19
PTCH2-202ENST00000438067 ZC3H12CQ9C0D7 883 aaKnown RBP22.46■■□□□ 1.19
PTCH2-202ENST00000438067 PHAXQ9H814 394 aaKnown RBP22.46■■□□□ 1.19
PTCH2-202ENST00000438067 SEC31BQ9NQW1 1179 aa22.46■■□□□ 1.19
PTCH2-202ENST00000438067 PODXL2Q9NZ53 605 aa22.46■■□□□ 1.19
PTCH2-202ENST00000438067 COL4A1P02462 1669 aa22.46■■□□□ 1.19
PTCH2-202ENST00000438067 FAM161AQ3B820 660 aa22.45■■□□□ 1.18
PTCH2-202ENST00000438067 DCPSQ96C86 337 aaKnown RBP22.45■■□□□ 1.18
PTCH2-202ENST00000438067 ELL2O00472 640 aaPredicted RBP22.44■■□□□ 1.18
PTCH2-202ENST00000438067 VIL1P09327 827 aaKnown RBP22.44■■□□□ 1.18
PTCH2-202ENST00000438067 HSP90B1P14625 803 aaKnown RBP22.44■■□□□ 1.18
PTCH2-202ENST00000438067 ADM5C9JUS6 153 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 RGMBQ6NW40 437 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 C2orf69Q8N8R5 385 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 MYD88Q99836 296 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 GBA2Q9HCG7 927 aaPredicted RBP22.43■■□□□ 1.18
PTCH2-202ENST00000438067 IFT57Q9NWB7 429 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
PTCH2-202ENST00000438067 APAF1O14727 1248 aa22.42■■□□□ 1.18
PTCH2-202ENST00000438067 UFL1O94874 794 aa22.42■■□□□ 1.18
PTCH2-202ENST00000438067 PCCAP05165 728 aaPredicted RBP22.42■■□□□ 1.18
PTCH2-202ENST00000438067 RGS19P49795 217 aa22.42■■□□□ 1.18
PTCH2-202ENST00000438067 CCDC191Q8NCU4 936 aa22.42■■□□□ 1.18
PTCH2-202ENST00000438067 MCOLN1Q9GZU1 580 aa22.42■■□□□ 1.18
PTCH2-202ENST00000438067 FAM155AB1AL88 458 aaPredicted RBP22.41■■□□□ 1.18
PTCH2-202ENST00000438067 G3V3G9 751 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 GNAI1P63096 354 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 KIF4BQ2VIQ3 1234 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 CCDC152Q4G0S7 254 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 DCAF8Q5TAQ9 597 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
PTCH2-202ENST00000438067 GGA1Q9UJY5 639 aa22.41■■□□□ 1.18
PTCH2-202ENST00000438067 PDE8AO60658 829 aa22.4■■□□□ 1.18
PTCH2-202ENST00000438067 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
PTCH2-202ENST00000438067 C8orf58Q8NAV2 365 aa22.4■■□□□ 1.18
PTCH2-202ENST00000438067 CCDC102AQ96A19 550 aa22.4■■□□□ 1.18
PTCH2-202ENST00000438067 MLLT1Q03111 559 aaPredicted RBP22.39■■□□□ 1.17
PTCH2-202ENST00000438067 SULF1Q8IWU6 871 aa22.39■■□□□ 1.17
PTCH2-202ENST00000438067 CCDC85AQ96PX6 553 aaPredicted RBP22.39■■□□□ 1.17
PTCH2-202ENST00000438067 CWC25Q9NXE8 425 aaPredicted RBP22.39■■□□□ 1.17
PTCH2-202ENST00000438067 GGA3Q9NZ52 723 aa22.39■■□□□ 1.17
PTCH2-202ENST00000438067 ASTN2O75129 1339 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 ZNF157P51786 506 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 ZNF280AP59817 542 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 KIF23Q02241 960 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 PRKRIP1Q9H875 184 aaPredicted RBP22.38■■□□□ 1.17
PTCH2-202ENST00000438067 DGKZQ13574 1117 aa22.37■■□□□ 1.17
PTCH2-202ENST00000438067 RSBN1LQ6PCB5 846 aaPredicted RBP22.37■■□□□ 1.17
PTCH2-202ENST00000438067 AGBL3Q8NEM8 1001 aa22.37■■□□□ 1.17
PTCH2-202ENST00000438067 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
PTCH2-202ENST00000438067 ANKRD18AQ8IVF6 992 aa22.36■■□□□ 1.17
PTCH2-202ENST00000438067 XDHP47989 1333 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 SCARF1Q14162 830 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 CCDC30Q5VVM6 783 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 CDCA5Q96FF9 252 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 GMLQ99445 158 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
PTCH2-202ENST00000438067 ANGEL2Q5VTE6 544 aaKnown RBP22.34■■□□□ 1.17
PTCH2-202ENST00000438067 SAGE1Q9NXZ1 904 aa22.34■■□□□ 1.17
PTCH2-202ENST00000438067 MAP3K2Q9Y2U5 619 aa22.34■■□□□ 1.17
PTCH2-202ENST00000438067 CASP8AP2Q9UKL3 1982 aa22.34■■□□□ 1.17
PTCH2-202ENST00000438067 ZNF609O15014 1411 aa22.33■■□□□ 1.17
PTCH2-202ENST00000438067 USP17L8P0C7I0 530 aa22.33■■□□□ 1.17
PTCH2-202ENST00000438067 ATP2B4P23634 1241 aa22.33■■□□□ 1.17
PTCH2-202ENST00000438067 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
PTCH2-202ENST00000438067 RNF186Q9NXI6 227 aa22.33■■□□□ 1.17
PTCH2-202ENST00000438067 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
PTCH2-202ENST00000438067 WTIPA6NIX2 430 aaPredicted RBP22.32■■□□□ 1.16
PTCH2-202ENST00000438067 TRPA1O75762 1119 aa22.32■■□□□ 1.16
PTCH2-202ENST00000438067 SLC10A3P09131 477 aa22.32■■□□□ 1.16
PTCH2-202ENST00000438067 PODNQ7Z5L7 613 aa22.32■■□□□ 1.16
PTCH2-202ENST00000438067 CSRNP1Q96S65 589 aa22.32■■□□□ 1.16
PTCH2-202ENST00000438067 PI4KAP2A4QPH2 592 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 USP17L3A6NCW0 530 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 USP17L4A6NCW7 530 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 IGKV5-2P06315 115 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 CTSWP56202 376 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 KSR2Q6VAB6 950 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 USP17L1Q7RTZ2 530 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 PI4KAP1Q8N8J0 262 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 CDC5LQ99459 802 aaKnown RBP22.31■■□□□ 1.16
PTCH2-202ENST00000438067 MYOZ2Q9NPC6 264 aa22.31■■□□□ 1.16
PTCH2-202ENST00000438067 POLR2AP24928 1970 aaKnown RBP22.3■■□□□ 1.16
PTCH2-202ENST00000438067 BSDC1Q9NW68 430 aaPredicted RBP22.29■■□□□ 1.16
PTCH2-202ENST00000438067 MINPP1Q9UNW1 487 aa22.29■■□□□ 1.16
PTCH2-202ENST00000438067 PITPNM2Q9BZ72 1349 aa22.29■■□□□ 1.16
PTCH2-202ENST00000438067 FKBP1BP68106 108 aa22.28■■□□□ 1.16
PTCH2-202ENST00000438067 GREM2Q9H772 168 aa22.28■■□□□ 1.16
PTCH2-202ENST00000438067 RASAL3Q86YV0 1011 aa22.27■■□□□ 1.16
PTCH2-202ENST00000438067 NEXNQ0ZGT2 675 aa22.26■■□□□ 1.15
PTCH2-202ENST00000438067 CWF19L2Q2TBE0 894 aaKnown RBP22.26■■□□□ 1.15
PTCH2-202ENST00000438067 REM2Q8IYK8 340 aaPredicted RBP22.26■■□□□ 1.15
PTCH2-202ENST00000438067 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
PTCH2-202ENST00000438067 SCAF8Q9UPN6 1271 aaKnown RBP22.26■■□□□ 1.15
PTCH2-202ENST00000438067 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms