RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 BCS1LQ9Y276 419 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 XDHP47989 1333 aa14.32□□□□□ -0.12
SNHG3-202ENST00000437681 RLBP1P12271 317 aa14.31□□□□□ -0.12
SNHG3-202ENST00000437681 RFX5P48382 616 aaPredicted RBP14.31□□□□□ -0.12
SNHG3-202ENST00000437681 SSH3Q8TE77 659 aa14.31□□□□□ -0.12
SNHG3-202ENST00000437681 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 TAOK3Q9H2K8 898 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 MED23Q9ULK4 1368 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 IGSF3O75054 1194 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 HMMRO75330 724 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 PDIA4P13667 645 aaKnown RBP14.3□□□□□ -0.12
SNHG3-202ENST00000437681 LMNB1P20700 586 aa14.3□□□□□ -0.12
SNHG3-202ENST00000437681 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
SNHG3-202ENST00000437681 LRRFIP2Q9Y608 721 aaKnown RBP14.3□□□□□ -0.12
SNHG3-202ENST00000437681 FAM161AQ3B820 660 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 HSP90AB4PQ58FF6 505 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 MPNDQ8N594 471 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 CELF1Q92879 486 aaKnown RBP14.29□□□□□ -0.12
SNHG3-202ENST00000437681 MPHOSPH8Q99549 860 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 TAF1P21675 1872 aa14.29□□□□□ -0.12
SNHG3-202ENST00000437681 IL15P40933 162 aaPredicted RBP14.28□□□□□ -0.12
SNHG3-202ENST00000437681 PANK1Q8TE04 598 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 GPR108Q9NPR9 543 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 UBE4AQ14139 1066 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 CLUAP1Q96AJ1 413 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 COL4A1P02462 1669 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 CCDC88AQ3V6T2 1871 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 EYA2O00167 538 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
SNHG3-202ENST00000437681 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
SNHG3-202ENST00000437681 NFKBIEO00221 500 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 C21orf2O43822 256 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 TAF7LQ5H9L4 462 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 DPP8Q6V1X1 898 aaPredicted RBP14.27□□□□□ -0.13
SNHG3-202ENST00000437681 ERC1Q8IUD2 1116 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
SNHG3-202ENST00000437681 TNNQ9UQP3 1299 aa14.27□□□□□ -0.13
SNHG3-202ENST00000437681 KIAA2012Q0VF49 1180 aa14.26□□□□□ -0.13
SNHG3-202ENST00000437681 CEP85Q6P2H3 762 aa14.26□□□□□ -0.13
SNHG3-202ENST00000437681 IARSP41252 1262 aaKnown RBP14.26□□□□□ -0.13
SNHG3-202ENST00000437681 ERICH6BQ5W0A0 696 aa14.26□□□□□ -0.13
SNHG3-202ENST00000437681 RAB11FIP3O75154 756 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
SNHG3-202ENST00000437681 LDHAL6AQ6ZMR3 332 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 ARHGAP27Q6ZUM4 889 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 ZNF646O15015 1829 aaPredicted RBP14.25□□□□□ -0.13
SNHG3-202ENST00000437681 FKBP1AP62942 108 aaKnown RBP14.25□□□□□ -0.13
SNHG3-202ENST00000437681 TBC1D16Q8TBP0 767 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 AKAP2Q9Y2D5 859 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 COG6Q9Y2V7 657 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 IRS2Q9Y4H2 1338 aa14.25□□□□□ -0.13
SNHG3-202ENST00000437681 GPSM2P81274 684 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 VGLL2Q8N8G2 317 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 JARID2Q92833 1246 aaPredicted RBP14.24□□□□□ -0.13
SNHG3-202ENST00000437681 SCN4AP35499 1836 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
SNHG3-202ENST00000437681 SRGAP3O43295 1099 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 CHRNDQ07001 517 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 PDE4CQ08493 712 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 CNNM1Q9NRU3 951 aa14.24□□□□□ -0.13
SNHG3-202ENST00000437681 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
SNHG3-202ENST00000437681 PLIN1O60240 522 aa14.23□□□□□ -0.13
SNHG3-202ENST00000437681 COA1Q9GZY4 146 aa14.23□□□□□ -0.13
SNHG3-202ENST00000437681 ZNF804BA4D1E1 1349 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 FZD9O00144 591 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 PDE8BO95263 885 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 HDAC1Q13547 482 aaPredicted RBP14.22□□□□□ -0.13
SNHG3-202ENST00000437681 PUM3Q15397 648 aaKnown RBP14.22□□□□□ -0.13
SNHG3-202ENST00000437681 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 FGFR2P21802 821 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 TMED8Q6PL24 325 aaPredicted RBP14.22□□□□□ -0.13
SNHG3-202ENST00000437681 PODNQ7Z5L7 613 aa14.22□□□□□ -0.13
SNHG3-202ENST00000437681 SEMA3EO15041 775 aa14.21□□□□□ -0.13
SNHG3-202ENST00000437681 G3BP1Q13283 466 aaKnown RBP eCLIP14.21□□□□□ -0.13
SNHG3-202ENST00000437681 ANKIB1Q9P2G1 1089 aa14.21□□□□□ -0.13
SNHG3-202ENST00000437681 C20orf194Q5TEA3 1177 aa14.21□□□□□ -0.14
SNHG3-202ENST00000437681 LPIN2Q92539 896 aa14.21□□□□□ -0.14
SNHG3-202ENST00000437681 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.14
SNHG3-202ENST00000437681 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 NIM1KQ8IY84 436 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 JDP2Q8WYK2 163 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 ZNF512BQ96KM6 892 aaPredicted RBP14.2□□□□□ -0.14
SNHG3-202ENST00000437681 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 ZNRF3Q9ULT6 936 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 MYO3BQ8WXR4 1341 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 UFL1O94874 794 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 RPS12P25398 132 aaKnown RBP14.2□□□□□ -0.14
SNHG3-202ENST00000437681 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
SNHG3-202ENST00000437681 ZC3H12CQ9C0D7 883 aaKnown RBP14.2□□□□□ -0.14
SNHG3-202ENST00000437681 NSFL1CQ9UNZ2 370 aaKnown RBP14.2□□□□□ -0.14
SNHG3-202ENST00000437681 IFIT1P09914 478 aaKnown RBP14.19□□□□□ -0.14
SNHG3-202ENST00000437681 SLC5A1P13866 664 aa14.19□□□□□ -0.14
SNHG3-202ENST00000437681 IL1R1P14778 569 aa14.19□□□□□ -0.14
SNHG3-202ENST00000437681 TNIP1Q15025 636 aa14.19□□□□□ -0.14
SNHG3-202ENST00000437681 METTL24Q5JXM2 366 aa14.19□□□□□ -0.14
SNHG3-202ENST00000437681 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms