RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CHMP4BQ9H444 224 aaKnown RBP8.84□□□□□ -0.99
LSM3P3-201ENST00000436601 PODXL2Q9NZ53 605 aa8.84□□□□□ -0.99
LSM3P3-201ENST00000436601 RREB1Q92766 1687 aa8.84□□□□□ -0.99
LSM3P3-201ENST00000436601 COL15A1P39059 1388 aa8.84□□□□□ -0.99
LSM3P3-201ENST00000436601 IBTKQ9P2D0 1353 aaPredicted RBP8.84□□□□□ -0.99
LSM3P3-201ENST00000436601 UTYO14607 1347 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 A0A087WZG4 1122 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 IGHDP01880 384 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 TRIM28Q13263 835 aaKnown RBP8.83□□□□□ -1
LSM3P3-201ENST00000436601 EZH2Q15910 746 aaKnown RBP8.83□□□□□ -1
LSM3P3-201ENST00000436601 NPM2Q86SE8 214 aaKnown RBP8.83□□□□□ -1
LSM3P3-201ENST00000436601 NLRP7Q8WX94 980 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 BCL2L12Q9HB09 334 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
LSM3P3-201ENST00000436601 LY75O60449 1722 aa8.83□□□□□ -1
LSM3P3-201ENST00000436601 GRM8O00222 908 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 GNAI3P08754 354 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
LSM3P3-201ENST00000436601 CASP7P55210 303 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 ZNF827Q17R98 1081 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 TUSC1Q2TAM9 212 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 DEFB132Q7Z7B7 95 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 SIRT2Q8IXJ6 389 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 ZNF34Q8IZ26 560 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 CCDC82Q8N4S0 544 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 SRP68Q9UHB9 627 aaKnown RBP8.82□□□□□ -1
LSM3P3-201ENST00000436601 NARFQ9UHQ1 456 aa8.82□□□□□ -1
LSM3P3-201ENST00000436601 COL5A3P25940 1745 aaPredicted RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 H7C1W4 665 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 GNAI2P04899 355 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 NUDT7P0C024 238 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 UBTFL1P0CB47 393 aaPredicted RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 GPTP24298 496 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 BAG6P46379 1132 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 SF3B2Q13435 895 aaKnown RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 HSP90AB3PQ58FF7 597 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 USPL1Q5W0Q7 1092 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 NLRP10Q86W26 655 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 CCDC125Q86Z20 511 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 CCDC191Q8NCU4 936 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 JARID2Q92833 1246 aaPredicted RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 KAZALD1Q96I82 304 aa8.81□□□□□ -1
LSM3P3-201ENST00000436601 CWC25Q9NXE8 425 aaPredicted RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 C9orf78Q9NZ63 289 aaPredicted RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 LRRFIP2Q9Y608 721 aaKnown RBP8.81□□□□□ -1
LSM3P3-201ENST00000436601 UBN2Q6ZU65 1347 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 C4BP0C0L5 1744 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
LSM3P3-201ENST00000436601 PSDA5PKW4 1024 aaPredicted RBP8.8□□□□□ -1
LSM3P3-201ENST00000436601 SSFA2P28290 1259 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 RFC4P35249 363 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 RFC5P40937 340 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 HDAC1Q13547 482 aaPredicted RBP8.8□□□□□ -1
LSM3P3-201ENST00000436601 CEP85Q6P2H3 762 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 CLEC4GQ6UXB4 293 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 SULF1Q8IWU6 871 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 RPAP2Q8IXW5 612 aaPredicted RBP8.8□□□□□ -1
LSM3P3-201ENST00000436601 ANKRD44Q8N8A2 993 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 SUCLG2Q96I99 432 aa8.8□□□□□ -1
LSM3P3-201ENST00000436601 USP42Q9H9J4 1324 aaKnown RBP8.8□□□□□ -1
LSM3P3-201ENST00000436601 ZPR1O75312 459 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 ATP8B2P98198 1209 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 EPHA10Q5JZY3 1008 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 SUSD4Q5VX71 490 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 TBC1D9BQ66K14 1250 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 UBE3BQ7Z3V4 1068 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 COL23A1Q86Y22 540 aaPredicted RBP8.79□□□□□ -1
LSM3P3-201ENST00000436601 SYNE4Q8N205 404 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 RWDD1Q9H446 243 aaPredicted RBP8.79□□□□□ -1
LSM3P3-201ENST00000436601 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 ZNF652Q9Y2D9 606 aa8.79□□□□□ -1
LSM3P3-201ENST00000436601 PNMA6EA0A0J9YXQ4 647 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 RCCD1A6NED2 376 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 SOCS7O14512 581 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 PCCAP05165 728 aaPredicted RBP8.78□□□□□ -1
LSM3P3-201ENST00000436601 GYS1P13807 737 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 CD46P15529 392 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 FOXO4P98177 505 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 SLC15A2Q16348 729 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 ARSIQ5FYB1 569 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 RTL5Q5HYW3 569 aaPredicted RBP8.78□□□□□ -1
LSM3P3-201ENST00000436601 PPP4R3BQ5MIZ7 849 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
LSM3P3-201ENST00000436601 FAM89AQ96GI7 184 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 NIP7Q9Y221 180 aaKnown RBP eCLIP8.78□□□□□ -1
LSM3P3-201ENST00000436601 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
LSM3P3-201ENST00000436601 NUP188Q5SRE5 1749 aa8.77□□□□□ -1
LSM3P3-201ENST00000436601 NTSR2O95665 410 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 HOXB3P14651 431 aaPredicted RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 GJA5P36382 358 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 MTX1Q13505 466 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 RABL6Q3YEC7 729 aaPredicted RBP8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 PARP10Q53GL7 1025 aa8.77□□□□□ -1.01
LSM3P3-201ENST00000436601 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms