RNA–Protein interactions for RNA: ENST00000436442.2

RPP21-223, Transcript of ribonuclease P/MRP subunit p21, human

TSL 1 (best) BASIC

Gene RPP21, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPP21-223	ENST00000436442	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
RPP21-223	ENST00000436442	PROSER3	Q2NL68	480 aa		13.17	□□□□□ -0.3
RPP21-223	ENST00000436442	SULF1	Q8IWU6	871 aa		13.17	□□□□□ -0.3
RPP21-223	ENST00000436442	R3HDML	Q9H3Y0	253 aa		13.17	□□□□□ -0.3
RPP21-223	ENST00000436442	ECE2	O60344	883 aa		13.16	□□□□□ -0.3
RPP21-223	ENST00000436442	MOB2	Q70IA6	237 aa		13.16	□□□□□ -0.3
RPP21-223	ENST00000436442	CELF1	Q92879	486 aa	Known RBP	13.16	□□□□□ -0.3
RPP21-223	ENST00000436442	GML	Q99445	158 aa		13.16	□□□□□ -0.3
RPP21-223	ENST00000436442	TRIOBP	Q9H2D6	2365 aa		13.16	□□□□□ -0.3
RPP21-223	ENST00000436442	RIMBP2	O15034	1052 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	GPSM2	P81274	684 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	DOK7	Q18PE1	504 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	ANGEL2	Q5VTE6	544 aa	Known RBP	13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	CFAP53	Q96M91	514 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	HDAC9	Q9UKV0	1011 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	NUDC	Q9Y266	331 aa		13.15	□□□□□ -0.3
RPP21-223	ENST00000436442	SH3TC1	Q8TE82	1336 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	POTEF	A5A3E0	1075 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	ANXA1	P04083	346 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	TCIRG1	Q13488	830 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	SCARF1	Q14162	830 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	SF3B3	Q15393	1217 aa	Known RBP	13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	TBC1D16	Q8TBP0	767 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	PLEKHF1	Q96S99	279 aa		13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.14	□□□□□ -0.31
RPP21-223	ENST00000436442	PITPNM2	Q9BZ72	1349 aa		13.13	□□□□□ -0.31
RPP21-223	ENST00000436442	TRMT112	Q9UI30	125 aa	Known RBP	13.13	□□□□□ -0.31
RPP21-223	ENST00000436442	UBE2Q2L	H0YL09	131 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	PPP2R1A	P30153	589 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	CNGB1	Q14028	1251 aa	Predicted RBP	13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	HSP90AB3P	Q58FF7	597 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	COPS6	Q7L5N1	327 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	AGBL3	Q8NEM8	1001 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	PODXL2	Q9NZ53	605 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	CUL9	Q8IWT3	2517 aa		13.12	□□□□□ -0.31
RPP21-223	ENST00000436442	C6orf229	H3BNL8	230 aa		13.11	□□□□□ -0.31
RPP21-223	ENST00000436442	FKTN	O75072	461 aa		13.11	□□□□□ -0.31
RPP21-223	ENST00000436442	TRIM26	Q12899	539 aa	Predicted RBP	13.11	□□□□□ -0.31
RPP21-223	ENST00000436442	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.11	□□□□□ -0.31
RPP21-223	ENST00000436442	NECTIN2	Q92692	538 aa		13.11	□□□□□ -0.31
RPP21-223	ENST00000436442	PRAMEF18	Q5VWM3	479 aa		13.1	□□□□□ -0.31
RPP21-223	ENST00000436442	XAGE3	Q8WTP9	111 aa		13.1	□□□□□ -0.31
RPP21-223	ENST00000436442	EYA3	Q99504	573 aa		13.1	□□□□□ -0.31
RPP21-223	ENST00000436442	MYOZ2	Q9NPC6	264 aa		13.1	□□□□□ -0.31
RPP21-223	ENST00000436442	SCAF8	Q9UPN6	1271 aa	Known RBP	13.1	□□□□□ -0.31
RPP21-223	ENST00000436442	NFE2L2	Q16236	605 aa		13.09	□□□□□ -0.31
RPP21-223	ENST00000436442	INTS3	Q68E01	1043 aa	Known RBP	13.09	□□□□□ -0.31
RPP21-223	ENST00000436442	ISCA1	Q9BUE6	129 aa		13.09	□□□□□ -0.31
RPP21-223	ENST00000436442	LAMA3	Q16787	3333 aa		13.08	□□□□□ -0.31
RPP21-223	ENST00000436442	EIF2S2	P20042	333 aa	Known RBP	13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	RPS8	P62241	208 aa	Known RBP	13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	LDLRAD1	Q5T700	205 aa		13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	OTOP1	Q7RTM1	612 aa		13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	FAM89A	Q96GI7	184 aa		13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.08	□□□□□ -0.32
RPP21-223	ENST00000436442	USP17L8	P0C7I0	530 aa		13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	CAP1	Q01518	475 aa		13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	PTPN12	Q05209	780 aa	Known RBP	13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	AIMP1	Q12904	312 aa	Known RBP	13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	NBPF9	Q3BBW0	867 aa		13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	ZNF428	Q96B54	188 aa		13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	ARMC5	Q96C12	935 aa		13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	COLQ	Q9Y215	455 aa	Predicted RBP	13.07	□□□□□ -0.32
RPP21-223	ENST00000436442	EN2	P19622	333 aa	Predicted RBP	13.06	□□□□□ -0.32
RPP21-223	ENST00000436442	SREBF2	Q12772	1141 aa		13.06	□□□□□ -0.32
RPP21-223	ENST00000436442	SPRYD7	Q5W111	196 aa		13.06	□□□□□ -0.32
RPP21-223	ENST00000436442	MKRN3	Q13064	507 aa	Known RBP	13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	TRIM28	Q13263	835 aa	Known RBP	13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	SEC31B	Q9NQW1	1179 aa		13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	BABAM1	Q9NWV8	329 aa		13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	TSPYL4	Q9UJ04	414 aa		13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	PTPN22	Q9Y2R2	807 aa		13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	TRIM17	Q9Y577	477 aa		13.05	□□□□□ -0.32
RPP21-223	ENST00000436442	WTIP	A6NIX2	430 aa	Predicted RBP	13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	WNT10B	O00744	389 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	UFL1	O94874	794 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	IFNL1	Q8IU54	200 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	PLBD2	Q8NHP8	589 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	OTUD5	Q96G74	571 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	PCGF6	Q9BYE7	350 aa		13.04	□□□□□ -0.32
RPP21-223	ENST00000436442	USP17L3	A6NCW0	530 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	USP17L4	A6NCW7	530 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	ALDH1A1	P00352	501 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	USP17L1	Q7RTZ2	530 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	PODN	Q7Z5L7	613 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	ZBED3	Q96IU2	234 aa	Predicted RBP	13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	GGA1	Q9UJY5	639 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	SSC5D	A1L4H1	1573 aa		13.03	□□□□□ -0.32
RPP21-223	ENST00000436442	ECM29	Q5VYK3	1845 aa		13.02	□□□□□ -0.32
RPP21-223	ENST00000436442	ATP5J2-PTCD1	G3V325	749 aa		13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	IRS4	O14654	1257 aa	Predicted RBP	13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	INHBE	P58166	350 aa		13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	MAP3K11	Q16584	847 aa		13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	KRT24	Q2M2I5	525 aa		13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	DACT2	Q5SW24	774 aa		13.02	□□□□□ -0.33
RPP21-223	ENST00000436442	ANKRD13D	Q6ZTN6	518 aa		13.01	□□□□□ -0.33
RPP21-223	ENST00000436442	MXD3	Q9BW11	206 aa		13.01	□□□□□ -0.33
RPP21-223	ENST00000436442	CHPF2	Q9P2E5	772 aa		13.01	□□□□□ -0.33
RPP21-223	ENST00000436442	ANKIB1	Q9P2G1	1089 aa		13.01	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms