RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
VPS50-203ENST00000436177 SLC10A5Q5PT55 438 aa10.06□□□□□ -0.8
VPS50-203ENST00000436177 TMC4Q7Z404 712 aa10.06□□□□□ -0.8
VPS50-203ENST00000436177 PLBD2Q8NHP8 589 aa10.06□□□□□ -0.8
VPS50-203ENST00000436177 ZNRF3Q9ULT6 936 aa10.06□□□□□ -0.8
VPS50-203ENST00000436177 ITGBL1O95965 494 aaPredicted RBP10.05□□□□□ -0.8
VPS50-203ENST00000436177 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
VPS50-203ENST00000436177 GRAPQ13588 217 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 TNIP1Q15025 636 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 KRT24Q2M2I5 525 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 USP50Q70EL3 339 aaPredicted RBP10.05□□□□□ -0.8
VPS50-203ENST00000436177 LRP10Q7Z4F1 713 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
VPS50-203ENST00000436177 BCL2L13Q9BXK5 485 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 SNED1Q8TER0 1413 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 NUP98P52948 1817 aa10.05□□□□□ -0.8
VPS50-203ENST00000436177 EPS15P42566 896 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 VEGFBP49765 207 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 SCNN1DP51172 638 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 GRM1Q13255 1194 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 DEFB115Q30KQ5 88 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 DUSP27Q5VZP5 1158 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 CIAPIN1Q6FI81 312 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 SP8Q8IXZ3 490 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 EFCAB3Q8N7B9 438 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 ADARB2Q9NS39 739 aaKnown RBP10.04□□□□□ -0.8
VPS50-203ENST00000436177 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 CDHR2Q9BYE9 1310 aa10.04□□□□□ -0.8
VPS50-203ENST00000436177 POTEB3A0JP26 581 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 RASSF10A6NK89 507 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 ECE1P42892 770 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 GMPSP49915 693 aaPredicted RBP10.03□□□□□ -0.8
VPS50-203ENST00000436177 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
VPS50-203ENST00000436177 KIAA2012Q0VF49 1180 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 POTEBQ6S5H4 581 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 RTFDC1Q9BY42 306 aaPredicted RBP10.03□□□□□ -0.8
VPS50-203ENST00000436177 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
VPS50-203ENST00000436177 ATP5J2-PTCD1G3V325 749 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 C6orf229H3BNL8 230 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 FOXN1O15353 648 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 RAD17O75943 681 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 GNAI1P63096 354 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 CXCL9Q07325 125 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
VPS50-203ENST00000436177 SLC51AQ86UW1 340 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 FAM89AQ96GI7 184 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 MBIPQ9NS73 344 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 IFT57Q9NWB7 429 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 NSFL1CQ9UNZ2 370 aaKnown RBP10.02□□□□□ -0.81
VPS50-203ENST00000436177 COL4A5P29400 1685 aa10.02□□□□□ -0.81
VPS50-203ENST00000436177 H7C1D1 291 aa10.01□□□□□ -0.81
VPS50-203ENST00000436177 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
VPS50-203ENST00000436177 DDX58O95786 925 aaKnown RBP10.01□□□□□ -0.81
VPS50-203ENST00000436177 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
VPS50-203ENST00000436177 CAPNS2Q96L46 248 aa10.01□□□□□ -0.81
VPS50-203ENST00000436177 EYA3Q99504 573 aa10.01□□□□□ -0.81
VPS50-203ENST00000436177 PRKRIP1Q9H875 184 aaPredicted RBP10.01□□□□□ -0.81
VPS50-203ENST00000436177 PRDM10Q9NQV6 1147 aa10.01□□□□□ -0.81
VPS50-203ENST00000436177 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
VPS50-203ENST00000436177 TRAF5O00463 557 aa10□□□□□ -0.81
VPS50-203ENST00000436177 APAF1O14727 1248 aa10□□□□□ -0.81
VPS50-203ENST00000436177 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
VPS50-203ENST00000436177 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
VPS50-203ENST00000436177 ZNF408Q9H9D4 720 aa10□□□□□ -0.81
VPS50-203ENST00000436177 ADAMTSL1Q8N6G6 1762 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
VPS50-203ENST00000436177 RIMBP2O15034 1052 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
VPS50-203ENST00000436177 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
VPS50-203ENST00000436177 SF3B3Q15393 1217 aaKnown RBP9.99□□□□□ -0.81
VPS50-203ENST00000436177 CCDC152Q4G0S7 254 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 CCDC30Q5VVM6 783 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 MICALL2Q8IY33 904 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 ZC3H15Q8WU90 426 aaKnown RBP9.99□□□□□ -0.81
VPS50-203ENST00000436177 STK31Q9BXU1 1019 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 ANKIB1Q9P2G1 1089 aa9.99□□□□□ -0.81
VPS50-203ENST00000436177 ANKRD36CQ5JPF3 1778 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 RPS12P25398 132 aaKnown RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 LBX1P52954 281 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 RPS8P62241 208 aaKnown RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 NEXNQ0ZGT2 675 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 CDC37L1Q7L3B6 337 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 ZNF710Q8N1W2 664 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 ZBTB38Q8NAP3 1195 aaPredicted RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 CELF1Q92879 486 aaKnown RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 GPR101Q96P66 508 aaPredicted RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 MYD88Q99836 296 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 GLIS2Q9BZE0 524 aaPredicted RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 ZC3H12CQ9C0D7 883 aaKnown RBP9.98□□□□□ -0.81
VPS50-203ENST00000436177 DBNDD1Q9H9R9 158 aa9.98□□□□□ -0.81
VPS50-203ENST00000436177 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms